Experiment: copper (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_28795 and AO356_28800 are separated by 46 nucleotides AO356_28800 and AO356_28805 are separated by 16 nucleotides
AO356_28795: AO356_28795 - hypothetical protein, at 6,695,893 to 6,697,041
_28795
AO356_28800: AO356_28800 - hypothetical protein, at 6,697,088 to 6,698,935
_28800
AO356_28805: AO356_28805 - MFS transporter, at 6,698,952 to 6,700,196
_28805
Position (kb)
6697
6698
6699 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6696.188 kb on - strand, within AO356_28795 at 6696.211 kb on + strand, within AO356_28795 at 6696.212 kb on - strand, within AO356_28795 at 6696.212 kb on - strand, within AO356_28795 at 6696.377 kb on - strand, within AO356_28795 at 6696.529 kb on + strand, within AO356_28795 at 6696.619 kb on + strand, within AO356_28795 at 6696.620 kb on - strand, within AO356_28795 at 6696.844 kb on + strand, within AO356_28795 at 6696.844 kb on + strand, within AO356_28795 at 6696.976 kb on + strand at 6696.976 kb on + strand at 6696.977 kb on - strand at 6697.009 kb on + strand at 6697.064 kb on - strand at 6697.082 kb on - strand at 6697.220 kb on + strand at 6697.539 kb on - strand, within AO356_28800 at 6697.614 kb on - strand, within AO356_28800 at 6697.614 kb on - strand, within AO356_28800 at 6697.614 kb on - strand, within AO356_28800 at 6697.887 kb on - strand, within AO356_28800 at 6697.890 kb on + strand, within AO356_28800 at 6697.890 kb on + strand, within AO356_28800 at 6697.891 kb on - strand, within AO356_28800 at 6698.399 kb on + strand, within AO356_28800 at 6698.444 kb on + strand, within AO356_28800 at 6698.444 kb on + strand, within AO356_28800 at 6698.445 kb on - strand, within AO356_28800 at 6698.549 kb on + strand, within AO356_28800 at 6698.882 kb on + strand at 6698.892 kb on - strand at 6698.892 kb on - strand at 6699.001 kb on - strand at 6699.007 kb on + strand at 6699.126 kb on + strand, within AO356_28805 at 6699.126 kb on + strand, within AO356_28805 at 6699.127 kb on - strand, within AO356_28805 at 6699.127 kb on - strand, within AO356_28805 at 6699.336 kb on + strand, within AO356_28805 at 6699.395 kb on - strand, within AO356_28805 at 6699.687 kb on + strand, within AO356_28805 at 6699.687 kb on + strand, within AO356_28805 at 6699.688 kb on - strand, within AO356_28805 at 6699.730 kb on + strand, within AO356_28805 at 6699.736 kb on - strand, within AO356_28805 at 6699.831 kb on + strand, within AO356_28805 at 6699.831 kb on + strand, within AO356_28805 at 6699.831 kb on + strand, within AO356_28805 at 6699.832 kb on - strand, within AO356_28805 at 6699.906 kb on + strand, within AO356_28805 at 6699.907 kb on - strand, within AO356_28805 at 6699.907 kb on - strand, within AO356_28805
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2.5 mM remove 6,696,188 - AO356_28795 0.26 +0.2 6,696,211 + AO356_28795 0.28 +2.1 6,696,212 - AO356_28795 0.28 -0.6 6,696,212 - AO356_28795 0.28 -2.4 6,696,377 - AO356_28795 0.42 +1.1 6,696,529 + AO356_28795 0.55 -1.0 6,696,619 + AO356_28795 0.63 -1.4 6,696,620 - AO356_28795 0.63 -2.1 6,696,844 + AO356_28795 0.83 +0.7 6,696,844 + AO356_28795 0.83 -1.7 6,696,976 + +0.1 6,696,976 + +1.7 6,696,977 - +0.9 6,697,009 + -0.2 6,697,064 - +2.1 6,697,082 - +0.9 6,697,220 + +0.9 6,697,539 - AO356_28800 0.24 -1.2 6,697,614 - AO356_28800 0.28 -1.2 6,697,614 - AO356_28800 0.28 -0.4 6,697,614 - AO356_28800 0.28 -0.2 6,697,887 - AO356_28800 0.43 -0.5 6,697,890 + AO356_28800 0.43 +0.8 6,697,890 + AO356_28800 0.43 +1.4 6,697,891 - AO356_28800 0.43 -0.6 6,698,399 + AO356_28800 0.71 +1.0 6,698,444 + AO356_28800 0.73 +0.4 6,698,444 + AO356_28800 0.73 -0.7 6,698,445 - AO356_28800 0.73 -0.6 6,698,549 + AO356_28800 0.79 +0.5 6,698,882 + +0.7 6,698,892 - -2.0 6,698,892 - +0.5 6,699,001 - -0.5 6,699,007 + +0.0 6,699,126 + AO356_28805 0.14 -0.8 6,699,126 + AO356_28805 0.14 +0.7 6,699,127 - AO356_28805 0.14 +0.1 6,699,127 - AO356_28805 0.14 +2.6 6,699,336 + AO356_28805 0.31 -1.1 6,699,395 - AO356_28805 0.36 +1.0 6,699,687 + AO356_28805 0.59 -2.1 6,699,687 + AO356_28805 0.59 +1.3 6,699,688 - AO356_28805 0.59 -0.4 6,699,730 + AO356_28805 0.62 +0.6 6,699,736 - AO356_28805 0.63 +0.2 6,699,831 + AO356_28805 0.71 +0.2 6,699,831 + AO356_28805 0.71 -0.6 6,699,831 + AO356_28805 0.71 +1.8 6,699,832 - AO356_28805 0.71 +0.2 6,699,906 + AO356_28805 0.77 -2.3 6,699,907 - AO356_28805 0.77 +0.2 6,699,907 - AO356_28805 0.77 +0.8
Or see this region's nucleotide sequence