Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_28405

Experiment: copper (II) chloride 2.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_28400 and AO356_28405 are separated by 39 nucleotidesAO356_28405 and AO356_28410 are separated by 377 nucleotides AO356_28400: AO356_28400 - dimethyl sulfone monooxygenase SfnG, at 6,604,696 to 6,605,793 _28400 AO356_28405: AO356_28405 - NADH-dependent FMN reductase, at 6,605,833 to 6,606,396 _28405 AO356_28410: AO356_28410 - monooxygenase, at 6,606,774 to 6,608,018 _28410 Position (kb) 6605 6606 6607Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 6604.904 kb on + strand, within AO356_28400at 6604.904 kb on + strand, within AO356_28400at 6604.905 kb on - strand, within AO356_28400at 6605.282 kb on + strand, within AO356_28400at 6605.283 kb on - strand, within AO356_28400at 6605.297 kb on + strand, within AO356_28400at 6605.604 kb on - strand, within AO356_28400at 6605.693 kb on + strandat 6605.693 kb on + strandat 6605.694 kb on - strandat 6605.694 kb on - strandat 6605.800 kb on + strandat 6605.963 kb on + strand, within AO356_28405at 6606.076 kb on + strand, within AO356_28405at 6606.135 kb on - strand, within AO356_28405at 6606.135 kb on - strand, within AO356_28405at 6606.401 kb on + strandat 6606.767 kb on + strandat 6606.768 kb on - strandat 6606.826 kb on - strandat 6606.972 kb on + strand, within AO356_28410at 6607.107 kb on - strand, within AO356_28410at 6607.252 kb on - strand, within AO356_28410at 6607.269 kb on - strand, within AO356_28410at 6607.293 kb on + strand, within AO356_28410at 6607.293 kb on + strand, within AO356_28410at 6607.294 kb on - strand, within AO356_28410at 6607.294 kb on - strand, within AO356_28410

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Per-strain Table

Position Strand Gene LocusTag Fraction copper (II) chloride 2.5 mM
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6,604,904 + AO356_28400 0.19 +0.3
6,604,904 + AO356_28400 0.19 +0.6
6,604,905 - AO356_28400 0.19 -2.5
6,605,282 + AO356_28400 0.53 -0.2
6,605,283 - AO356_28400 0.53 -1.6
6,605,297 + AO356_28400 0.55 +0.2
6,605,604 - AO356_28400 0.83 -3.4
6,605,693 + +1.2
6,605,693 + +0.9
6,605,694 - -0.5
6,605,694 - +0.9
6,605,800 + -1.1
6,605,963 + AO356_28405 0.23 +0.9
6,606,076 + AO356_28405 0.43 +0.5
6,606,135 - AO356_28405 0.54 +0.8
6,606,135 - AO356_28405 0.54 -1.4
6,606,401 + +1.4
6,606,767 + -1.8
6,606,768 - -1.3
6,606,826 - +0.4
6,606,972 + AO356_28410 0.16 -2.1
6,607,107 - AO356_28410 0.27 +0.6
6,607,252 - AO356_28410 0.38 -0.7
6,607,269 - AO356_28410 0.40 -2.0
6,607,293 + AO356_28410 0.42 -1.1
6,607,293 + AO356_28410 0.42 +1.9
6,607,294 - AO356_28410 0.42 -0.1
6,607,294 - AO356_28410 0.42 +0.2

Or see this region's nucleotide sequence