Experiment: copper (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26250 and AO356_26255 are separated by 32 nucleotides AO356_26255 and AO356_26260 overlap by 4 nucleotides AO356_26260 and AO356_26265 overlap by 4 nucleotides AO356_26265 and AO356_26270 overlap by 4 nucleotides
AO356_26250: AO356_26250 - AraC family transcriptional regulator, at 5,946,389 to 5,947,282
_26250
AO356_26255: AO356_26255 - chemotaxis protein CheY, at 5,947,315 to 5,947,782
_26255
AO356_26260: AO356_26260 - histidine kinase, at 5,947,779 to 5,950,091
_26260
AO356_26265: AO356_26265 - LuxR family transcriptional regulator, at 5,950,088 to 5,950,756
_26265
AO356_26270: AO356_26270 - histidine kinase, at 5,950,753 to 5,951,937
_26270
Position (kb) 5947
5948
5949
5950
5951 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5946.948 kb on + strand, within AO356_26250 at 5946.948 kb on + strand, within AO356_26250 at 5947.393 kb on - strand, within AO356_26255 at 5947.394 kb on + strand, within AO356_26255 at 5947.394 kb on + strand, within AO356_26255 at 5947.395 kb on - strand, within AO356_26255 at 5947.395 kb on - strand, within AO356_26255 at 5947.545 kb on - strand, within AO356_26255 at 5947.662 kb on + strand, within AO356_26255 at 5947.662 kb on + strand, within AO356_26255 at 5947.663 kb on - strand, within AO356_26255 at 5947.688 kb on - strand, within AO356_26255 at 5947.798 kb on + strand at 5947.799 kb on - strand at 5947.799 kb on - strand at 5947.835 kb on + strand at 5947.836 kb on - strand at 5948.155 kb on + strand, within AO356_26260 at 5948.155 kb on + strand, within AO356_26260 at 5948.491 kb on + strand, within AO356_26260 at 5948.491 kb on + strand, within AO356_26260 at 5948.524 kb on - strand, within AO356_26260 at 5948.736 kb on + strand, within AO356_26260 at 5948.737 kb on - strand, within AO356_26260 at 5948.737 kb on - strand, within AO356_26260 at 5948.737 kb on - strand, within AO356_26260 at 5949.070 kb on + strand, within AO356_26260 at 5949.071 kb on - strand, within AO356_26260 at 5949.137 kb on - strand, within AO356_26260 at 5949.220 kb on + strand, within AO356_26260 at 5949.900 kb on - strand at 5949.982 kb on + strand at 5949.983 kb on - strand at 5950.446 kb on + strand, within AO356_26265 at 5950.762 kb on + strand at 5950.762 kb on + strand at 5950.763 kb on - strand at 5950.942 kb on + strand, within AO356_26270
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2.5 mM remove 5,946,948 + AO356_26250 0.63 +1.0 5,946,948 + AO356_26250 0.63 -2.0 5,947,393 - AO356_26255 0.17 -1.2 5,947,394 + AO356_26255 0.17 -0.4 5,947,394 + AO356_26255 0.17 -0.1 5,947,395 - AO356_26255 0.17 -1.4 5,947,395 - AO356_26255 0.17 +1.9 5,947,545 - AO356_26255 0.49 +0.2 5,947,662 + AO356_26255 0.74 +0.5 5,947,662 + AO356_26255 0.74 +1.6 5,947,663 - AO356_26255 0.74 -0.2 5,947,688 - AO356_26255 0.80 -1.4 5,947,798 + -0.3 5,947,799 - +1.8 5,947,799 - -0.2 5,947,835 + -3.1 5,947,836 - -1.2 5,948,155 + AO356_26260 0.16 +1.8 5,948,155 + AO356_26260 0.16 +0.6 5,948,491 + AO356_26260 0.31 -1.1 5,948,491 + AO356_26260 0.31 -2.9 5,948,524 - AO356_26260 0.32 +1.2 5,948,736 + AO356_26260 0.41 -1.4 5,948,737 - AO356_26260 0.41 -0.6 5,948,737 - AO356_26260 0.41 -1.1 5,948,737 - AO356_26260 0.41 -0.1 5,949,070 + AO356_26260 0.56 -0.8 5,949,071 - AO356_26260 0.56 -0.1 5,949,137 - AO356_26260 0.59 +1.7 5,949,220 + AO356_26260 0.62 -0.6 5,949,900 - +0.6 5,949,982 + +2.4 5,949,983 - -0.1 5,950,446 + AO356_26265 0.54 +1.2 5,950,762 + +0.6 5,950,762 + -1.9 5,950,763 - +0.2 5,950,942 + AO356_26270 0.16 +0.6
Or see this region's nucleotide sequence