Experiment: copper (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_18805 and AO356_18810 are separated by 303 nucleotides AO356_18810 and AO356_18815 are separated by 526 nucleotides
AO356_18805: AO356_18805 - magnesium transporter, at 4,222,504 to 4,223,946
_18805
AO356_18810: AO356_18810 - DNA-binding protein, at 4,224,250 to 4,224,576
_18810
AO356_18815: AO356_18815 - tRNA-Arg, at 4,225,103 to 4,225,179
_18815
Position (kb)
4224
4225 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 4224.107 kb on + strand at 4224.274 kb on + strand at 4224.274 kb on + strand at 4224.274 kb on + strand at 4224.274 kb on + strand at 4224.274 kb on + strand at 4224.275 kb on - strand at 4224.275 kb on - strand at 4224.275 kb on - strand at 4224.275 kb on - strand at 4224.275 kb on - strand at 4224.474 kb on + strand, within AO356_18810 at 4224.520 kb on + strand, within AO356_18810 at 4224.520 kb on + strand, within AO356_18810 at 4224.521 kb on - strand, within AO356_18810 at 4224.521 kb on - strand, within AO356_18810 at 4224.521 kb on - strand, within AO356_18810 at 4224.521 kb on - strand, within AO356_18810 at 4224.576 kb on + strand at 4224.580 kb on + strand at 4224.580 kb on + strand at 4224.581 kb on - strand at 4224.581 kb on - strand at 4224.581 kb on - strand at 4224.581 kb on - strand at 4224.593 kb on - strand at 4224.635 kb on + strand at 4224.674 kb on + strand at 4224.675 kb on - strand at 4224.675 kb on - strand at 4224.897 kb on + strand at 4224.897 kb on + strand at 4224.897 kb on + strand at 4224.897 kb on + strand at 4224.898 kb on - strand at 4224.898 kb on - strand at 4224.899 kb on + strand at 4224.899 kb on + strand at 4224.899 kb on + strand at 4224.900 kb on - strand at 4224.904 kb on + strand at 4224.905 kb on - strand at 4224.927 kb on - strand at 4224.927 kb on - strand at 4224.931 kb on + strand at 4224.931 kb on + strand at 4224.931 kb on + strand at 4224.932 kb on - strand at 4224.932 kb on - strand at 4224.932 kb on - strand at 4224.999 kb on + strand at 4224.999 kb on + strand at 4224.999 kb on + strand at 4224.999 kb on + strand at 4224.999 kb on + strand at 4225.000 kb on - strand at 4225.010 kb on + strand at 4225.011 kb on - strand at 4225.011 kb on - strand at 4225.011 kb on - strand at 4225.017 kb on - strand at 4225.017 kb on - strand at 4225.140 kb on - strand, within AO356_18815 at 4225.140 kb on - strand, within AO356_18815 at 4225.181 kb on + strand at 4225.182 kb on - strand at 4225.182 kb on - strand at 4225.182 kb on - strand at 4225.184 kb on - strand at 4225.184 kb on - strand at 4225.184 kb on - strand at 4225.334 kb on + strand at 4225.335 kb on - strand at 4225.343 kb on + strand at 4225.343 kb on + strand at 4225.344 kb on - strand at 4225.344 kb on - strand at 4225.344 kb on - strand at 4225.344 kb on - strand at 4225.378 kb on + strand at 4225.379 kb on - strand at 4225.394 kb on + strand at 4225.395 kb on - strand at 4225.401 kb on + strand at 4225.402 kb on - strand at 4225.402 kb on - strand at 4225.402 kb on - strand at 4225.429 kb on + strand at 4225.429 kb on + strand at 4225.429 kb on + strand at 4225.429 kb on + strand at 4225.429 kb on + strand at 4225.430 kb on - strand at 4225.430 kb on - strand at 4225.430 kb on - strand at 4225.430 kb on - strand at 4225.430 kb on - strand at 4225.430 kb on - strand at 4225.430 kb on - strand at 4225.433 kb on + strand at 4225.433 kb on + strand at 4225.434 kb on - strand at 4225.434 kb on - strand at 4225.434 kb on - strand at 4225.441 kb on + strand at 4225.441 kb on + strand at 4225.441 kb on + strand at 4225.442 kb on - strand at 4225.442 kb on - strand at 4225.442 kb on - strand at 4225.442 kb on - strand at 4225.442 kb on - strand at 4225.442 kb on - strand at 4225.445 kb on + strand at 4225.445 kb on + strand at 4225.445 kb on + strand at 4225.445 kb on + strand at 4225.445 kb on + strand at 4225.445 kb on + strand at 4225.445 kb on + strand at 4225.445 kb on + strand at 4225.446 kb on - strand at 4225.446 kb on - strand at 4225.446 kb on - strand at 4225.446 kb on - strand at 4225.550 kb on + strand at 4225.551 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2.5 mM remove 4,224,107 + +0.9 4,224,274 + +1.8 4,224,274 + -2.3 4,224,274 + -2.2 4,224,274 + +1.2 4,224,274 + -3.8 4,224,275 - -0.6 4,224,275 - +0.3 4,224,275 - +0.8 4,224,275 - -2.0 4,224,275 - -1.1 4,224,474 + AO356_18810 0.69 -0.3 4,224,520 + AO356_18810 0.83 +0.5 4,224,520 + AO356_18810 0.83 +1.2 4,224,521 - AO356_18810 0.83 +0.6 4,224,521 - AO356_18810 0.83 -2.3 4,224,521 - AO356_18810 0.83 +0.3 4,224,521 - AO356_18810 0.83 -0.2 4,224,576 + -2.0 4,224,580 + +0.1 4,224,580 + +0.3 4,224,581 - -0.1 4,224,581 - -1.3 4,224,581 - -0.4 4,224,581 - -2.5 4,224,593 - -0.4 4,224,635 + -1.2 4,224,674 + +1.2 4,224,675 - +1.0 4,224,675 - +1.3 4,224,897 + -0.5 4,224,897 + -1.4 4,224,897 + -0.0 4,224,897 + +0.0 4,224,898 - +0.7 4,224,898 - +3.2 4,224,899 + +0.2 4,224,899 + +0.5 4,224,899 + -0.5 4,224,900 - +1.5 4,224,904 + -3.3 4,224,905 - +2.3 4,224,927 - +2.5 4,224,927 - +0.2 4,224,931 + -0.5 4,224,931 + -0.5 4,224,931 + +0.8 4,224,932 - -0.1 4,224,932 - +1.8 4,224,932 - +1.7 4,224,999 + -2.7 4,224,999 + +1.3 4,224,999 + -1.3 4,224,999 + -3.2 4,224,999 + +2.4 4,225,000 - +1.1 4,225,010 + -3.2 4,225,011 - -0.4 4,225,011 - +2.4 4,225,011 - -0.3 4,225,017 - +2.3 4,225,017 - -0.0 4,225,140 - AO356_18815 0.48 -1.7 4,225,140 - AO356_18815 0.48 -1.3 4,225,181 + +0.0 4,225,182 - -0.9 4,225,182 - -0.2 4,225,182 - +0.4 4,225,184 - -2.3 4,225,184 - +0.8 4,225,184 - +1.8 4,225,334 + +0.2 4,225,335 - +0.3 4,225,343 + -1.7 4,225,343 + -2.9 4,225,344 - -1.2 4,225,344 - -0.8 4,225,344 - -0.4 4,225,344 - -0.6 4,225,378 + -0.4 4,225,379 - -0.4 4,225,394 + -2.7 4,225,395 - -2.3 4,225,401 + -0.2 4,225,402 - -0.7 4,225,402 - -0.4 4,225,402 - +0.3 4,225,429 + +0.2 4,225,429 + -2.0 4,225,429 + -0.4 4,225,429 + +0.2 4,225,429 + -1.7 4,225,430 - +3.1 4,225,430 - +1.8 4,225,430 - -1.1 4,225,430 - +2.6 4,225,430 - -2.9 4,225,430 - -2.3 4,225,430 - -0.7 4,225,433 + -0.8 4,225,433 + +0.2 4,225,434 - -2.1 4,225,434 - -1.0 4,225,434 - -0.1 4,225,441 + -1.0 4,225,441 + -2.9 4,225,441 + -2.0 4,225,442 - -0.1 4,225,442 - -3.3 4,225,442 - -0.5 4,225,442 - -1.4 4,225,442 - -2.5 4,225,442 - -1.2 4,225,445 + +0.3 4,225,445 + -2.3 4,225,445 + +1.6 4,225,445 + -1.5 4,225,445 + -3.9 4,225,445 + +0.7 4,225,445 + -0.4 4,225,445 + -0.5 4,225,446 - -2.9 4,225,446 - +0.8 4,225,446 - +0.1 4,225,446 - +0.0 4,225,550 + +0.7 4,225,551 - -0.3
Or see this region's nucleotide sequence