Experiment: copper (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16370 and AO356_16375 are separated by 48 nucleotides AO356_16375 and AO356_16380 overlap by 1 nucleotides AO356_16380 and AO356_16385 are separated by 112 nucleotides
AO356_16370: AO356_16370 - hypothetical protein, at 3,699,364 to 3,700,089
_16370
AO356_16375: AO356_16375 - hypothetical protein, at 3,700,138 to 3,701,064
_16375
AO356_16380: AO356_16380 - hypothetical protein, at 3,701,064 to 3,701,420
_16380
AO356_16385: AO356_16385 - transcriptional regulator, at 3,701,533 to 3,702,447
_16385
Position (kb)
3701
3702 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3700.279 kb on - strand, within AO356_16375 at 3700.337 kb on - strand, within AO356_16375 at 3700.620 kb on + strand, within AO356_16375 at 3700.620 kb on + strand, within AO356_16375 at 3700.621 kb on - strand, within AO356_16375 at 3700.621 kb on - strand, within AO356_16375 at 3700.870 kb on + strand, within AO356_16375 at 3700.870 kb on + strand, within AO356_16375 at 3700.870 kb on + strand, within AO356_16375 at 3700.870 kb on + strand, within AO356_16375 at 3700.871 kb on - strand, within AO356_16375 at 3700.951 kb on + strand, within AO356_16375 at 3700.951 kb on + strand, within AO356_16375 at 3700.951 kb on + strand, within AO356_16375 at 3700.952 kb on - strand, within AO356_16375 at 3701.244 kb on + strand, within AO356_16380 at 3701.244 kb on + strand, within AO356_16380 at 3701.244 kb on + strand, within AO356_16380 at 3701.244 kb on + strand, within AO356_16380 at 3701.244 kb on + strand, within AO356_16380 at 3701.245 kb on - strand, within AO356_16380 at 3701.245 kb on - strand, within AO356_16380 at 3701.245 kb on - strand, within AO356_16380 at 3701.290 kb on + strand, within AO356_16380 at 3701.291 kb on - strand, within AO356_16380 at 3701.344 kb on + strand, within AO356_16380 at 3701.344 kb on + strand, within AO356_16380 at 3701.344 kb on + strand, within AO356_16380 at 3701.344 kb on + strand, within AO356_16380 at 3701.344 kb on + strand, within AO356_16380 at 3701.344 kb on + strand, within AO356_16380 at 3701.344 kb on + strand, within AO356_16380 at 3701.344 kb on + strand, within AO356_16380 at 3701.344 kb on + strand, within AO356_16380 at 3701.345 kb on - strand, within AO356_16380 at 3701.345 kb on - strand, within AO356_16380 at 3701.345 kb on - strand, within AO356_16380 at 3701.345 kb on - strand, within AO356_16380 at 3701.345 kb on - strand, within AO356_16380 at 3701.345 kb on - strand, within AO356_16380 at 3701.350 kb on + strand, within AO356_16380 at 3701.350 kb on + strand, within AO356_16380 at 3701.350 kb on + strand, within AO356_16380 at 3701.350 kb on + strand, within AO356_16380 at 3701.350 kb on + strand, within AO356_16380 at 3701.350 kb on + strand, within AO356_16380 at 3701.350 kb on + strand, within AO356_16380 at 3701.350 kb on + strand, within AO356_16380 at 3701.350 kb on + strand, within AO356_16380 at 3701.350 kb on + strand, within AO356_16380 at 3701.351 kb on - strand, within AO356_16380 at 3701.351 kb on - strand, within AO356_16380 at 3701.351 kb on - strand, within AO356_16380 at 3701.351 kb on - strand, within AO356_16380 at 3701.351 kb on - strand, within AO356_16380 at 3701.351 kb on - strand, within AO356_16380 at 3701.351 kb on - strand, within AO356_16380 at 3701.351 kb on - strand, within AO356_16380 at 3701.351 kb on - strand, within AO356_16380 at 3701.351 kb on - strand, within AO356_16380 at 3701.414 kb on + strand at 3701.414 kb on + strand at 3701.415 kb on - strand at 3701.415 kb on - strand at 3701.415 kb on - strand at 3701.415 kb on - strand at 3701.415 kb on - strand at 3701.415 kb on - strand at 3701.415 kb on - strand at 3701.415 kb on - strand at 3701.472 kb on - strand at 3701.514 kb on - strand at 3701.531 kb on - strand at 3701.703 kb on + strand, within AO356_16385 at 3701.703 kb on + strand, within AO356_16385 at 3701.703 kb on + strand, within AO356_16385 at 3701.703 kb on + strand, within AO356_16385 at 3701.703 kb on + strand, within AO356_16385 at 3701.704 kb on - strand, within AO356_16385 at 3701.704 kb on - strand, within AO356_16385 at 3701.704 kb on - strand, within AO356_16385 at 3701.704 kb on - strand, within AO356_16385 at 3701.704 kb on - strand, within AO356_16385 at 3701.734 kb on + strand, within AO356_16385 at 3701.734 kb on + strand, within AO356_16385 at 3701.734 kb on + strand, within AO356_16385 at 3701.735 kb on - strand, within AO356_16385 at 3702.062 kb on + strand, within AO356_16385 at 3702.062 kb on + strand, within AO356_16385 at 3702.063 kb on - strand, within AO356_16385 at 3702.069 kb on + strand, within AO356_16385 at 3702.307 kb on + strand, within AO356_16385 at 3702.307 kb on + strand, within AO356_16385 at 3702.403 kb on + strand at 3702.404 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2.5 mM remove 3,700,279 - AO356_16375 0.15 -0.1 3,700,337 - AO356_16375 0.21 +1.1 3,700,620 + AO356_16375 0.52 +0.4 3,700,620 + AO356_16375 0.52 +1.5 3,700,621 - AO356_16375 0.52 -0.6 3,700,621 - AO356_16375 0.52 -0.3 3,700,870 + AO356_16375 0.79 +0.1 3,700,870 + AO356_16375 0.79 +1.7 3,700,870 + AO356_16375 0.79 -0.2 3,700,870 + AO356_16375 0.79 -1.2 3,700,871 - AO356_16375 0.79 +0.8 3,700,951 + AO356_16375 0.88 +0.9 3,700,951 + AO356_16375 0.88 +3.1 3,700,951 + AO356_16375 0.88 +0.4 3,700,952 - AO356_16375 0.88 -0.1 3,701,244 + AO356_16380 0.50 +1.8 3,701,244 + AO356_16380 0.50 -0.2 3,701,244 + AO356_16380 0.50 -0.6 3,701,244 + AO356_16380 0.50 -0.8 3,701,244 + AO356_16380 0.50 -2.2 3,701,245 - AO356_16380 0.51 -0.8 3,701,245 - AO356_16380 0.51 +0.0 3,701,245 - AO356_16380 0.51 +0.1 3,701,290 + AO356_16380 0.63 +1.4 3,701,291 - AO356_16380 0.64 -3.3 3,701,344 + AO356_16380 0.78 +1.0 3,701,344 + AO356_16380 0.78 +0.4 3,701,344 + AO356_16380 0.78 +0.9 3,701,344 + AO356_16380 0.78 -0.7 3,701,344 + AO356_16380 0.78 -0.6 3,701,344 + AO356_16380 0.78 +2.5 3,701,344 + AO356_16380 0.78 +0.4 3,701,344 + AO356_16380 0.78 -1.6 3,701,344 + AO356_16380 0.78 +2.5 3,701,345 - AO356_16380 0.79 +0.6 3,701,345 - AO356_16380 0.79 -1.2 3,701,345 - AO356_16380 0.79 +0.3 3,701,345 - AO356_16380 0.79 +0.0 3,701,345 - AO356_16380 0.79 -0.4 3,701,345 - AO356_16380 0.79 -2.2 3,701,350 + AO356_16380 0.80 +1.9 3,701,350 + AO356_16380 0.80 +1.4 3,701,350 + AO356_16380 0.80 -2.2 3,701,350 + AO356_16380 0.80 +2.0 3,701,350 + AO356_16380 0.80 +3.7 3,701,350 + AO356_16380 0.80 -1.1 3,701,350 + AO356_16380 0.80 +0.8 3,701,350 + AO356_16380 0.80 -3.2 3,701,350 + AO356_16380 0.80 -2.2 3,701,350 + AO356_16380 0.80 +1.8 3,701,351 - AO356_16380 0.80 -2.0 3,701,351 - AO356_16380 0.80 -0.6 3,701,351 - AO356_16380 0.80 -2.3 3,701,351 - AO356_16380 0.80 +2.1 3,701,351 - AO356_16380 0.80 +2.4 3,701,351 - AO356_16380 0.80 -2.2 3,701,351 - AO356_16380 0.80 +1.1 3,701,351 - AO356_16380 0.80 -1.1 3,701,351 - AO356_16380 0.80 -1.2 3,701,351 - AO356_16380 0.80 +0.7 3,701,414 + -1.5 3,701,414 + -2.2 3,701,415 - +0.7 3,701,415 - +0.8 3,701,415 - +0.4 3,701,415 - +0.4 3,701,415 - +1.9 3,701,415 - +0.4 3,701,415 - +2.4 3,701,415 - -1.5 3,701,472 - -0.5 3,701,514 - -2.4 3,701,531 - -3.0 3,701,703 + AO356_16385 0.19 -2.2 3,701,703 + AO356_16385 0.19 -3.3 3,701,703 + AO356_16385 0.19 -1.6 3,701,703 + AO356_16385 0.19 -2.3 3,701,703 + AO356_16385 0.19 -0.6 3,701,704 - AO356_16385 0.19 +0.6 3,701,704 - AO356_16385 0.19 -0.2 3,701,704 - AO356_16385 0.19 -1.2 3,701,704 - AO356_16385 0.19 +1.9 3,701,704 - AO356_16385 0.19 +0.4 3,701,734 + AO356_16385 0.22 -2.7 3,701,734 + AO356_16385 0.22 -0.1 3,701,734 + AO356_16385 0.22 -1.9 3,701,735 - AO356_16385 0.22 +0.4 3,702,062 + AO356_16385 0.58 +1.1 3,702,062 + AO356_16385 0.58 -3.3 3,702,063 - AO356_16385 0.58 -0.7 3,702,069 + AO356_16385 0.59 -0.4 3,702,307 + AO356_16385 0.85 +0.2 3,702,307 + AO356_16385 0.85 -0.8 3,702,403 + -0.0 3,702,404 - +2.1
Or see this region's nucleotide sequence