Experiment: copper (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_13230 and AO356_13235 are separated by 86 nucleotides AO356_13235 and AO356_13240 are separated by 116 nucleotides AO356_13240 and AO356_13245 are separated by 242 nucleotides
AO356_13230: AO356_13230 - hypothetical protein, at 3,007,731 to 3,009,098
_13230
AO356_13235: AO356_13235 - diacylglycerol kinase, at 3,009,185 to 3,009,697
_13235
AO356_13240: AO356_13240 - L-cystine transporter tcyP, at 3,009,814 to 3,011,205
_13240
AO356_13245: AO356_13245 - phosphorylcholine phosphatase, at 3,011,448 to 3,012,503
_13245
Position (kb)
3009
3010
3011
3012 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3009.172 kb on + strand at 3009.695 kb on + strand at 3009.695 kb on + strand at 3009.696 kb on - strand at 3009.696 kb on - strand at 3009.696 kb on - strand at 3010.188 kb on + strand, within AO356_13240 at 3010.403 kb on + strand, within AO356_13240 at 3010.403 kb on + strand, within AO356_13240 at 3010.403 kb on + strand, within AO356_13240 at 3010.404 kb on - strand, within AO356_13240 at 3010.490 kb on + strand, within AO356_13240 at 3010.491 kb on - strand, within AO356_13240 at 3010.746 kb on - strand, within AO356_13240 at 3010.987 kb on + strand, within AO356_13240 at 3010.987 kb on + strand, within AO356_13240 at 3010.987 kb on + strand, within AO356_13240 at 3010.988 kb on - strand, within AO356_13240 at 3010.988 kb on - strand, within AO356_13240 at 3010.988 kb on - strand, within AO356_13240 at 3010.991 kb on + strand, within AO356_13240 at 3010.991 kb on + strand, within AO356_13240 at 3010.992 kb on - strand, within AO356_13240 at 3010.992 kb on - strand, within AO356_13240 at 3010.992 kb on - strand, within AO356_13240 at 3011.054 kb on + strand, within AO356_13240 at 3011.054 kb on + strand, within AO356_13240 at 3011.054 kb on + strand, within AO356_13240 at 3011.055 kb on - strand, within AO356_13240 at 3011.055 kb on - strand, within AO356_13240 at 3011.133 kb on + strand at 3011.133 kb on + strand at 3011.133 kb on + strand at 3011.133 kb on + strand at 3011.133 kb on + strand at 3011.133 kb on + strand at 3011.133 kb on + strand at 3011.133 kb on + strand at 3011.133 kb on + strand at 3011.133 kb on + strand at 3011.133 kb on + strand at 3011.133 kb on + strand at 3011.133 kb on + strand at 3011.133 kb on + strand at 3011.133 kb on + strand at 3011.133 kb on + strand at 3011.134 kb on - strand at 3011.134 kb on - strand at 3011.134 kb on - strand at 3011.134 kb on - strand at 3011.134 kb on - strand at 3011.173 kb on + strand at 3011.173 kb on + strand at 3011.267 kb on + strand at 3011.267 kb on + strand at 3011.267 kb on + strand at 3011.267 kb on + strand at 3011.268 kb on - strand at 3011.278 kb on + strand at 3011.278 kb on + strand at 3011.282 kb on + strand at 3011.291 kb on - strand at 3011.291 kb on - strand at 3011.308 kb on + strand at 3011.309 kb on - strand at 3011.327 kb on + strand at 3011.372 kb on + strand at 3011.372 kb on + strand at 3011.372 kb on + strand at 3011.372 kb on + strand at 3011.373 kb on - strand at 3011.373 kb on - strand at 3011.373 kb on - strand at 3011.373 kb on - strand at 3011.373 kb on - strand at 3011.373 kb on - strand at 3011.373 kb on - strand at 3011.588 kb on + strand, within AO356_13245 at 3011.588 kb on + strand, within AO356_13245 at 3011.589 kb on - strand, within AO356_13245 at 3011.592 kb on + strand, within AO356_13245 at 3011.592 kb on + strand, within AO356_13245 at 3011.592 kb on + strand, within AO356_13245 at 3011.593 kb on - strand, within AO356_13245 at 3011.593 kb on - strand, within AO356_13245 at 3011.593 kb on - strand, within AO356_13245 at 3011.623 kb on - strand, within AO356_13245 at 3011.757 kb on + strand, within AO356_13245 at 3011.757 kb on + strand, within AO356_13245 at 3011.758 kb on - strand, within AO356_13245 at 3011.758 kb on - strand, within AO356_13245 at 3011.758 kb on - strand, within AO356_13245 at 3011.760 kb on + strand, within AO356_13245 at 3011.760 kb on + strand, within AO356_13245 at 3011.760 kb on + strand, within AO356_13245 at 3011.760 kb on + strand, within AO356_13245 at 3011.760 kb on + strand, within AO356_13245 at 3011.760 kb on + strand, within AO356_13245 at 3011.761 kb on - strand, within AO356_13245 at 3011.761 kb on - strand, within AO356_13245 at 3011.761 kb on - strand, within AO356_13245 at 3011.761 kb on - strand, within AO356_13245 at 3011.761 kb on - strand, within AO356_13245 at 3011.761 kb on - strand, within AO356_13245 at 3011.761 kb on - strand, within AO356_13245 at 3011.761 kb on - strand, within AO356_13245 at 3011.764 kb on - strand, within AO356_13245 at 3011.764 kb on - strand, within AO356_13245 at 3011.797 kb on - strand, within AO356_13245 at 3011.829 kb on - strand, within AO356_13245 at 3011.850 kb on + strand, within AO356_13245 at 3011.850 kb on + strand, within AO356_13245 at 3011.851 kb on - strand, within AO356_13245 at 3011.851 kb on - strand, within AO356_13245 at 3011.895 kb on + strand, within AO356_13245 at 3011.895 kb on + strand, within AO356_13245 at 3011.895 kb on + strand, within AO356_13245 at 3011.895 kb on + strand, within AO356_13245 at 3011.895 kb on + strand, within AO356_13245 at 3011.895 kb on + strand, within AO356_13245 at 3011.895 kb on + strand, within AO356_13245 at 3011.895 kb on + strand, within AO356_13245 at 3011.895 kb on + strand, within AO356_13245 at 3011.895 kb on + strand, within AO356_13245 at 3011.895 kb on + strand, within AO356_13245 at 3011.896 kb on - strand, within AO356_13245 at 3011.896 kb on - strand, within AO356_13245 at 3011.896 kb on - strand, within AO356_13245 at 3011.896 kb on - strand, within AO356_13245 at 3011.896 kb on - strand, within AO356_13245 at 3011.896 kb on - strand, within AO356_13245 at 3011.896 kb on - strand, within AO356_13245 at 3011.896 kb on - strand, within AO356_13245 at 3011.898 kb on + strand, within AO356_13245 at 3011.898 kb on + strand, within AO356_13245 at 3011.898 kb on + strand, within AO356_13245 at 3011.898 kb on + strand, within AO356_13245 at 3011.898 kb on + strand, within AO356_13245 at 3011.898 kb on + strand, within AO356_13245 at 3011.898 kb on + strand, within AO356_13245 at 3011.898 kb on + strand, within AO356_13245 at 3011.899 kb on - strand, within AO356_13245 at 3011.899 kb on - strand, within AO356_13245 at 3011.899 kb on - strand, within AO356_13245 at 3011.899 kb on - strand, within AO356_13245 at 3011.899 kb on - strand, within AO356_13245 at 3011.899 kb on - strand, within AO356_13245 at 3011.922 kb on + strand, within AO356_13245 at 3011.967 kb on + strand, within AO356_13245 at 3011.967 kb on + strand, within AO356_13245 at 3011.968 kb on - strand, within AO356_13245 at 3011.968 kb on - strand, within AO356_13245 at 3011.968 kb on - strand, within AO356_13245 at 3011.968 kb on - strand, within AO356_13245 at 3012.000 kb on + strand, within AO356_13245 at 3012.000 kb on + strand, within AO356_13245 at 3012.000 kb on + strand, within AO356_13245 at 3012.000 kb on + strand, within AO356_13245 at 3012.000 kb on + strand, within AO356_13245 at 3012.001 kb on - strand, within AO356_13245 at 3012.001 kb on - strand, within AO356_13245 at 3012.001 kb on - strand, within AO356_13245 at 3012.001 kb on - strand, within AO356_13245 at 3012.001 kb on - strand, within AO356_13245 at 3012.001 kb on - strand, within AO356_13245 at 3012.001 kb on - strand, within AO356_13245 at 3012.001 kb on - strand, within AO356_13245 at 3012.031 kb on + strand, within AO356_13245 at 3012.031 kb on + strand, within AO356_13245 at 3012.031 kb on + strand, within AO356_13245 at 3012.032 kb on - strand, within AO356_13245 at 3012.032 kb on - strand, within AO356_13245 at 3012.057 kb on + strand, within AO356_13245 at 3012.058 kb on - strand, within AO356_13245 at 3012.058 kb on - strand, within AO356_13245 at 3012.063 kb on + strand, within AO356_13245 at 3012.063 kb on + strand, within AO356_13245 at 3012.165 kb on + strand, within AO356_13245 at 3012.166 kb on - strand, within AO356_13245 at 3012.166 kb on - strand, within AO356_13245 at 3012.166 kb on - strand, within AO356_13245 at 3012.166 kb on - strand, within AO356_13245 at 3012.166 kb on - strand, within AO356_13245 at 3012.166 kb on - strand, within AO356_13245 at 3012.166 kb on - strand, within AO356_13245 at 3012.166 kb on - strand, within AO356_13245 at 3012.195 kb on + strand, within AO356_13245 at 3012.195 kb on + strand, within AO356_13245 at 3012.195 kb on + strand, within AO356_13245 at 3012.195 kb on + strand, within AO356_13245 at 3012.195 kb on + strand, within AO356_13245 at 3012.196 kb on - strand, within AO356_13245 at 3012.196 kb on - strand, within AO356_13245 at 3012.196 kb on - strand, within AO356_13245 at 3012.196 kb on - strand, within AO356_13245 at 3012.196 kb on - strand, within AO356_13245 at 3012.196 kb on - strand, within AO356_13245 at 3012.204 kb on + strand, within AO356_13245 at 3012.205 kb on - strand, within AO356_13245 at 3012.205 kb on - strand, within AO356_13245
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2.5 mM remove 3,009,172 + -0.1 3,009,695 + +0.6 3,009,695 + -0.6 3,009,696 - +0.9 3,009,696 - -0.4 3,009,696 - -0.3 3,010,188 + AO356_13240 0.27 +1.4 3,010,403 + AO356_13240 0.42 +0.2 3,010,403 + AO356_13240 0.42 +0.1 3,010,403 + AO356_13240 0.42 -2.2 3,010,404 - AO356_13240 0.42 +2.1 3,010,490 + AO356_13240 0.49 +1.2 3,010,491 - AO356_13240 0.49 +0.4 3,010,746 - AO356_13240 0.67 -0.5 3,010,987 + AO356_13240 0.84 +1.4 3,010,987 + AO356_13240 0.84 +0.5 3,010,987 + AO356_13240 0.84 -1.0 3,010,988 - AO356_13240 0.84 -2.4 3,010,988 - AO356_13240 0.84 +1.1 3,010,988 - AO356_13240 0.84 -1.0 3,010,991 + AO356_13240 0.85 +0.1 3,010,991 + AO356_13240 0.85 +1.0 3,010,992 - AO356_13240 0.85 +1.4 3,010,992 - AO356_13240 0.85 -2.4 3,010,992 - AO356_13240 0.85 -0.6 3,011,054 + AO356_13240 0.89 -1.2 3,011,054 + AO356_13240 0.89 +1.0 3,011,054 + AO356_13240 0.89 -1.2 3,011,055 - AO356_13240 0.89 -2.4 3,011,055 - AO356_13240 0.89 +0.4 3,011,133 + +1.4 3,011,133 + -2.6 3,011,133 + +0.9 3,011,133 + -0.2 3,011,133 + +0.8 3,011,133 + -0.8 3,011,133 + -0.8 3,011,133 + -1.6 3,011,133 + -0.6 3,011,133 + +1.5 3,011,133 + -0.4 3,011,133 + -0.4 3,011,133 + +0.2 3,011,133 + -2.2 3,011,133 + -0.4 3,011,133 + -0.3 3,011,134 - +0.6 3,011,134 - -0.2 3,011,134 - +0.5 3,011,134 - +1.0 3,011,134 - -0.0 3,011,173 + -2.1 3,011,173 + -1.2 3,011,267 + -2.4 3,011,267 + +2.0 3,011,267 + -1.2 3,011,267 + -0.6 3,011,268 - -3.0 3,011,278 + -0.4 3,011,278 + +0.8 3,011,282 + +1.0 3,011,291 - -1.9 3,011,291 - -3.3 3,011,308 + -0.4 3,011,309 - +0.2 3,011,327 + +0.7 3,011,372 + +0.7 3,011,372 + +0.6 3,011,372 + -2.2 3,011,372 + -0.9 3,011,373 - -2.2 3,011,373 - -2.4 3,011,373 - -2.0 3,011,373 - +0.4 3,011,373 - -1.5 3,011,373 - -3.7 3,011,373 - -4.0 3,011,588 + AO356_13245 0.13 +0.6 3,011,588 + AO356_13245 0.13 -0.6 3,011,589 - AO356_13245 0.13 -0.3 3,011,592 + AO356_13245 0.14 -1.0 3,011,592 + AO356_13245 0.14 -1.1 3,011,592 + AO356_13245 0.14 -1.6 3,011,593 - AO356_13245 0.14 -1.1 3,011,593 - AO356_13245 0.14 -0.4 3,011,593 - AO356_13245 0.14 -0.3 3,011,623 - AO356_13245 0.17 -1.6 3,011,757 + AO356_13245 0.29 -2.4 3,011,757 + AO356_13245 0.29 +0.0 3,011,758 - AO356_13245 0.29 +0.4 3,011,758 - AO356_13245 0.29 -0.5 3,011,758 - AO356_13245 0.29 -0.3 3,011,760 + AO356_13245 0.30 +0.7 3,011,760 + AO356_13245 0.30 -1.2 3,011,760 + AO356_13245 0.30 -0.9 3,011,760 + AO356_13245 0.30 +0.8 3,011,760 + AO356_13245 0.30 +0.8 3,011,760 + AO356_13245 0.30 +0.8 3,011,761 - AO356_13245 0.30 +1.9 3,011,761 - AO356_13245 0.30 +0.6 3,011,761 - AO356_13245 0.30 -0.6 3,011,761 - AO356_13245 0.30 +1.0 3,011,761 - AO356_13245 0.30 -1.2 3,011,761 - AO356_13245 0.30 -0.5 3,011,761 - AO356_13245 0.30 -0.6 3,011,761 - AO356_13245 0.30 +0.7 3,011,764 - AO356_13245 0.30 -2.4 3,011,764 - AO356_13245 0.30 -3.5 3,011,797 - AO356_13245 0.33 -0.8 3,011,829 - AO356_13245 0.36 +0.1 3,011,850 + AO356_13245 0.38 +0.4 3,011,850 + AO356_13245 0.38 -0.0 3,011,851 - AO356_13245 0.38 +0.8 3,011,851 - AO356_13245 0.38 -0.1 3,011,895 + AO356_13245 0.42 -1.6 3,011,895 + AO356_13245 0.42 -0.6 3,011,895 + AO356_13245 0.42 +1.1 3,011,895 + AO356_13245 0.42 +1.2 3,011,895 + AO356_13245 0.42 -2.8 3,011,895 + AO356_13245 0.42 +0.4 3,011,895 + AO356_13245 0.42 -1.2 3,011,895 + AO356_13245 0.42 -3.1 3,011,895 + AO356_13245 0.42 -0.9 3,011,895 + AO356_13245 0.42 +0.0 3,011,895 + AO356_13245 0.42 +2.9 3,011,896 - AO356_13245 0.42 +0.7 3,011,896 - AO356_13245 0.42 -1.4 3,011,896 - AO356_13245 0.42 +0.2 3,011,896 - AO356_13245 0.42 +0.1 3,011,896 - AO356_13245 0.42 -0.3 3,011,896 - AO356_13245 0.42 -2.0 3,011,896 - AO356_13245 0.42 -1.5 3,011,896 - AO356_13245 0.42 -1.0 3,011,898 + AO356_13245 0.43 +0.6 3,011,898 + AO356_13245 0.43 +0.0 3,011,898 + AO356_13245 0.43 +0.6 3,011,898 + AO356_13245 0.43 -0.6 3,011,898 + AO356_13245 0.43 -2.6 3,011,898 + AO356_13245 0.43 +0.5 3,011,898 + AO356_13245 0.43 +0.9 3,011,898 + AO356_13245 0.43 +0.8 3,011,899 - AO356_13245 0.43 +2.0 3,011,899 - AO356_13245 0.43 -0.3 3,011,899 - AO356_13245 0.43 -0.5 3,011,899 - AO356_13245 0.43 +0.9 3,011,899 - AO356_13245 0.43 +0.0 3,011,899 - AO356_13245 0.43 -0.2 3,011,922 + AO356_13245 0.45 +1.4 3,011,967 + AO356_13245 0.49 -0.8 3,011,967 + AO356_13245 0.49 -1.1 3,011,968 - AO356_13245 0.49 +0.6 3,011,968 - AO356_13245 0.49 -4.2 3,011,968 - AO356_13245 0.49 -1.2 3,011,968 - AO356_13245 0.49 +1.0 3,012,000 + AO356_13245 0.52 +1.5 3,012,000 + AO356_13245 0.52 -0.0 3,012,000 + AO356_13245 0.52 -2.6 3,012,000 + AO356_13245 0.52 -1.2 3,012,000 + AO356_13245 0.52 +0.4 3,012,001 - AO356_13245 0.52 -2.0 3,012,001 - AO356_13245 0.52 +0.4 3,012,001 - AO356_13245 0.52 +1.1 3,012,001 - AO356_13245 0.52 -0.5 3,012,001 - AO356_13245 0.52 -2.0 3,012,001 - AO356_13245 0.52 +0.8 3,012,001 - AO356_13245 0.52 -0.8 3,012,001 - AO356_13245 0.52 +1.6 3,012,031 + AO356_13245 0.55 +0.7 3,012,031 + AO356_13245 0.55 +0.6 3,012,031 + AO356_13245 0.55 +0.1 3,012,032 - AO356_13245 0.55 +2.9 3,012,032 - AO356_13245 0.55 -3.2 3,012,057 + AO356_13245 0.58 -2.4 3,012,058 - AO356_13245 0.58 -1.4 3,012,058 - AO356_13245 0.58 -0.4 3,012,063 + AO356_13245 0.58 +0.7 3,012,063 + AO356_13245 0.58 -2.4 3,012,165 + AO356_13245 0.68 +1.7 3,012,166 - AO356_13245 0.68 +0.7 3,012,166 - AO356_13245 0.68 -1.6 3,012,166 - AO356_13245 0.68 -0.6 3,012,166 - AO356_13245 0.68 -0.5 3,012,166 - AO356_13245 0.68 -1.5 3,012,166 - AO356_13245 0.68 +0.9 3,012,166 - AO356_13245 0.68 +0.4 3,012,166 - AO356_13245 0.68 -2.0 3,012,195 + AO356_13245 0.71 -0.6 3,012,195 + AO356_13245 0.71 -3.1 3,012,195 + AO356_13245 0.71 -3.0 3,012,195 + AO356_13245 0.71 -0.8 3,012,195 + AO356_13245 0.71 +2.2 3,012,196 - AO356_13245 0.71 -1.1 3,012,196 - AO356_13245 0.71 +3.5 3,012,196 - AO356_13245 0.71 +0.6 3,012,196 - AO356_13245 0.71 -2.4 3,012,196 - AO356_13245 0.71 -0.6 3,012,196 - AO356_13245 0.71 +0.2 3,012,204 + AO356_13245 0.72 -0.3 3,012,205 - AO356_13245 0.72 -1.2 3,012,205 - AO356_13245 0.72 -0.0
Or see this region's nucleotide sequence