Experiment: copper (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_10175 and AO356_10180 overlap by 1 nucleotides AO356_10180 and AO356_10185 are separated by 269 nucleotides
AO356_10175: AO356_10175 - transcription accessory protein, at 2,295,021 to 2,297,345
_10175
AO356_10180: AO356_10180 - hypothetical protein, at 2,297,345 to 2,297,728
_10180
AO356_10185: AO356_10185 - glutamate--cysteine ligase, at 2,297,998 to 2,299,581
_10185
Position (kb)
2297
2298 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2296.422 kb on + strand, within AO356_10175 at 2296.731 kb on + strand, within AO356_10175 at 2297.585 kb on + strand, within AO356_10180 at 2297.585 kb on + strand, within AO356_10180 at 2297.585 kb on + strand, within AO356_10180 at 2297.585 kb on + strand, within AO356_10180 at 2297.585 kb on + strand, within AO356_10180 at 2297.586 kb on - strand, within AO356_10180 at 2297.586 kb on - strand, within AO356_10180 at 2297.724 kb on + strand at 2297.724 kb on + strand at 2297.724 kb on + strand at 2297.724 kb on + strand at 2297.724 kb on + strand at 2297.724 kb on + strand at 2297.724 kb on + strand at 2297.724 kb on + strand at 2297.725 kb on - strand at 2297.725 kb on - strand at 2297.725 kb on - strand at 2297.725 kb on - strand at 2297.725 kb on - strand at 2297.725 kb on - strand at 2297.725 kb on - strand at 2297.726 kb on + strand at 2297.726 kb on + strand at 2297.726 kb on + strand at 2297.726 kb on + strand at 2297.726 kb on + strand at 2297.726 kb on + strand at 2297.726 kb on + strand at 2297.727 kb on - strand at 2297.727 kb on - strand at 2297.727 kb on - strand at 2297.727 kb on - strand at 2297.727 kb on - strand at 2297.727 kb on - strand at 2297.727 kb on - strand at 2297.727 kb on - strand at 2297.727 kb on - strand at 2297.727 kb on - strand at 2297.727 kb on - strand at 2297.727 kb on - strand at 2297.727 kb on - strand at 2297.727 kb on - strand at 2297.751 kb on - strand at 2297.929 kb on + strand at 2297.943 kb on + strand at 2297.943 kb on + strand at 2297.944 kb on - strand at 2297.944 kb on - strand at 2297.944 kb on - strand at 2298.011 kb on + strand at 2298.012 kb on - strand at 2298.185 kb on - strand, within AO356_10185 at 2298.295 kb on + strand, within AO356_10185 at 2298.296 kb on - strand, within AO356_10185 at 2298.296 kb on - strand, within AO356_10185 at 2298.296 kb on - strand, within AO356_10185 at 2298.296 kb on - strand, within AO356_10185 at 2298.355 kb on + strand, within AO356_10185 at 2298.359 kb on - strand, within AO356_10185 at 2298.359 kb on - strand, within AO356_10185 at 2298.388 kb on + strand, within AO356_10185 at 2298.388 kb on + strand, within AO356_10185 at 2298.388 kb on + strand, within AO356_10185 at 2298.388 kb on + strand, within AO356_10185 at 2298.388 kb on + strand, within AO356_10185 at 2298.388 kb on + strand, within AO356_10185 at 2298.389 kb on - strand, within AO356_10185 at 2298.389 kb on - strand, within AO356_10185 at 2298.389 kb on - strand, within AO356_10185 at 2298.395 kb on - strand, within AO356_10185 at 2298.455 kb on - strand, within AO356_10185 at 2298.544 kb on + strand, within AO356_10185 at 2298.544 kb on + strand, within AO356_10185 at 2298.544 kb on + strand, within AO356_10185 at 2298.544 kb on + strand, within AO356_10185 at 2298.545 kb on - strand, within AO356_10185 at 2298.592 kb on + strand, within AO356_10185 at 2298.593 kb on - strand, within AO356_10185 at 2298.593 kb on - strand, within AO356_10185 at 2298.593 kb on - strand, within AO356_10185 at 2298.679 kb on + strand, within AO356_10185 at 2298.680 kb on - strand, within AO356_10185
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2.5 mM remove 2,296,422 + AO356_10175 0.60 -1.1 2,296,731 + AO356_10175 0.74 +0.9 2,297,585 + AO356_10180 0.62 -1.9 2,297,585 + AO356_10180 0.62 -0.1 2,297,585 + AO356_10180 0.62 +1.7 2,297,585 + AO356_10180 0.62 -1.7 2,297,585 + AO356_10180 0.62 +1.1 2,297,586 - AO356_10180 0.63 -1.5 2,297,586 - AO356_10180 0.63 +0.9 2,297,724 + +1.3 2,297,724 + -0.2 2,297,724 + +1.7 2,297,724 + -1.1 2,297,724 + -0.5 2,297,724 + -2.5 2,297,724 + -1.4 2,297,724 + -1.1 2,297,725 - +0.0 2,297,725 - -1.0 2,297,725 - -0.4 2,297,725 - +0.5 2,297,725 - +1.4 2,297,725 - -0.2 2,297,725 - +0.7 2,297,726 + +0.3 2,297,726 + -2.7 2,297,726 + -3.4 2,297,726 + +0.9 2,297,726 + -1.9 2,297,726 + +0.5 2,297,726 + -1.9 2,297,727 - +0.1 2,297,727 - +1.5 2,297,727 - +0.5 2,297,727 - +0.7 2,297,727 - -0.8 2,297,727 - +0.6 2,297,727 - +0.9 2,297,727 - -0.9 2,297,727 - +0.7 2,297,727 - -1.1 2,297,727 - -2.0 2,297,727 - -1.5 2,297,727 - -2.4 2,297,727 - -1.7 2,297,751 - +3.2 2,297,929 + -3.6 2,297,943 + +1.3 2,297,943 + -2.7 2,297,944 - +0.6 2,297,944 - +2.2 2,297,944 - +2.1 2,298,011 + -0.9 2,298,012 - +0.9 2,298,185 - AO356_10185 0.12 -0.5 2,298,295 + AO356_10185 0.19 -0.9 2,298,296 - AO356_10185 0.19 +0.8 2,298,296 - AO356_10185 0.19 -2.5 2,298,296 - AO356_10185 0.19 -1.9 2,298,296 - AO356_10185 0.19 -1.1 2,298,355 + AO356_10185 0.23 -0.5 2,298,359 - AO356_10185 0.23 -1.9 2,298,359 - AO356_10185 0.23 -1.1 2,298,388 + AO356_10185 0.25 -0.5 2,298,388 + AO356_10185 0.25 -1.9 2,298,388 + AO356_10185 0.25 +1.5 2,298,388 + AO356_10185 0.25 -1.5 2,298,388 + AO356_10185 0.25 -1.5 2,298,388 + AO356_10185 0.25 -0.1 2,298,389 - AO356_10185 0.25 -0.5 2,298,389 - AO356_10185 0.25 -0.5 2,298,389 - AO356_10185 0.25 -1.1 2,298,395 - AO356_10185 0.25 +0.5 2,298,455 - AO356_10185 0.29 -1.1 2,298,544 + AO356_10185 0.34 -0.1 2,298,544 + AO356_10185 0.34 -1.1 2,298,544 + AO356_10185 0.34 +0.5 2,298,544 + AO356_10185 0.34 -2.4 2,298,545 - AO356_10185 0.35 -1.1 2,298,592 + AO356_10185 0.38 -0.5 2,298,593 - AO356_10185 0.38 +1.5 2,298,593 - AO356_10185 0.38 -0.1 2,298,593 - AO356_10185 0.38 -2.4 2,298,679 + AO356_10185 0.43 -2.4 2,298,680 - AO356_10185 0.43 -0.1
Or see this region's nucleotide sequence