Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_04490

Experiment: copper (II) chloride 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2.5 mM
1,014,477	+		AO356_04480	0.79	+0.6
1,014,477	+		AO356_04480	0.79	-0.2
1,014,477	+		AO356_04480	0.79	-2.7
1,014,477	+		AO356_04480	0.79	-1.3
1,014,477	+		AO356_04480	0.79	-1.1
1,014,478	-		AO356_04480	0.79	-0.3
1,014,478	-		AO356_04480	0.79	-0.6
1,014,478	-		AO356_04480	0.79	-1.3
1,014,478	-		AO356_04480	0.79	+0.8
1,014,478	-		AO356_04480	0.79	-1.0
1,014,528	-		AO356_04480	0.86	-2.0
1,014,593	+				-0.4
1,014,593	+				+1.2
1,014,593	+				-2.5
1,014,593	+				+0.3
1,014,594	-				+0.3
1,014,594	-				+1.6
1,014,594	-				-2.9
1,014,594	-				+2.0
1,014,594	-				+0.7
1,014,608	+				+0.9
1,014,642	+				+0.9
1,014,642	+				-1.0
1,014,643	-				-0.1
1,014,707	+				+0.6
1,014,707	+				+0.4
1,014,707	+				-1.4
1,014,708	-				+1.0
1,014,708	-				-1.5
1,014,712	+				+1.3
1,014,712	+				-2.0
1,014,713	-				-2.9
1,014,781	+				-0.5
1,014,781	+				+1.1
1,014,782	-		AO356_04485	0.10	-0.5
1,014,782	-		AO356_04485	0.10	+0.3
1,014,782	-		AO356_04485	0.10	+0.2
1,014,782	-		AO356_04485	0.10	-0.3
1,014,835	+		AO356_04485	0.24	+0.7
1,014,835	+		AO356_04485	0.24	+0.1
1,014,976	+		AO356_04485	0.63	+0.4
1,014,976	+		AO356_04485	0.63	-2.4
1,014,976	+		AO356_04485	0.63	+0.4
1,014,976	+		AO356_04485	0.63	-3.5
1,014,976	+		AO356_04485	0.63	-1.1
1,014,977	-		AO356_04485	0.63	+0.5
1,014,977	-		AO356_04485	0.63	-1.0
1,014,977	-		AO356_04485	0.63	+1.1
1,014,977	-		AO356_04485	0.63	+2.0
1,015,002	+		AO356_04485	0.70	+1.0
1,015,002	+		AO356_04485	0.70	+0.3
1,015,002	+		AO356_04485	0.70	+1.4
1,015,002	+		AO356_04485	0.70	+0.9
1,015,002	+		AO356_04485	0.70	-3.6
1,015,003	-		AO356_04485	0.70	+0.3
1,015,003	-		AO356_04485	0.70	+0.7
1,015,290	+				-2.2
1,015,291	-				-0.8
1,015,959	+		AO356_04490	0.41	-2.1
1,015,959	+		AO356_04490	0.41	+1.2
1,016,176	+		AO356_04490	0.54	+0.6
1,016,266	-		AO356_04490	0.60	-3.2
1,016,295	+		AO356_04490	0.62	-1.7
1,016,295	+		AO356_04490	0.62	-2.0
1,016,296	-		AO356_04490	0.62	+0.3
1,016,296	-		AO356_04490	0.62	+1.2
1,016,485	-		AO356_04490	0.73	-0.0
1,016,503	+		AO356_04490	0.74	-0.4
1,016,504	-		AO356_04490	0.75	-2.3
1,016,504	-		AO356_04490	0.75	+0.3
1,016,609	+		AO356_04490	0.81	+0.4
1,016,610	-		AO356_04490	0.81	-1.0
1,016,610	-		AO356_04490	0.81	-0.9
1,016,610	-		AO356_04490	0.81	+0.3
1,016,627	+		AO356_04490	0.82	+1.2
1,016,627	+		AO356_04490	0.82	-1.3
1,016,628	-		AO356_04490	0.82	-2.9
1,016,628	-		AO356_04490	0.82	+1.0
1,016,673	+		AO356_04490	0.85	-2.9
1,016,673	+		AO356_04490	0.85	-0.5
1,016,673	+		AO356_04490	0.85	+0.5
1,016,673	+		AO356_04490	0.85	-1.6
1,016,673	+		AO356_04490	0.85	-0.8
1,016,674	-		AO356_04490	0.85	+0.1
1,016,674	-		AO356_04490	0.85	+0.6
1,016,674	-		AO356_04490	0.85	+0.5
1,016,674	-		AO356_04490	0.85	-0.0
1,016,674	-		AO356_04490	0.85	+0.3
1,016,674	-		AO356_04490	0.85	-1.4
1,016,726	+		AO356_04490	0.88	+0.6
1,016,727	-		AO356_04490	0.88	-3.4
1,016,772	+				-3.4
1,016,772	+				+1.2
1,016,772	+				+0.6
1,016,772	+				+1.2
1,016,773	-				+2.0
1,016,773	-				+1.4
1,016,779	-				-2.5
1,016,945	+				+0.8
1,016,945	+				+1.5
1,016,946	-				-2.7
1,016,946	-				-0.7
1,016,950	+				+0.6
1,016,950	+				+0.6
1,016,950	+				-2.9
1,016,950	+				+0.8
1,016,950	+				-1.7
1,016,951	-				+1.7
1,016,951	-				-0.4
1,016,951	-				+3.6
1,016,951	-				+1.4
1,016,951	-				+0.8
1,016,951	-				-1.9
1,016,951	-				-0.2
1,016,951	-				-0.3
1,016,951	-				-1.7
1,016,951	-				+1.3
1,016,951	-				+0.3
1,016,954	+				+0.0
1,016,976	+				+1.6
1,016,976	+				-2.9
1,016,976	+				+0.7
1,016,976	+				+1.9
1,016,977	-				-0.6
1,016,977	-				-0.3
1,016,977	-				-2.3
1,016,977	-				+0.8
1,016,978	+				-0.6
1,016,979	-				+0.6
1,016,979	-				-1.7
1,016,979	-				-0.5
1,016,979	-				-1.5
1,016,987	-				+0.7
1,016,987	-				+0.0
1,017,072	+				+0.6
1,017,072	+				+2.8
1,017,072	+				-0.6
1,017,108	+				+0.2
1,017,108	+				+0.1
1,017,164	+				+0.8
1,017,164	+				+0.3
1,017,164	+				+0.4
1,017,164	+				+1.0
1,017,164	+				+1.3
1,017,164	+				+0.8
1,017,165	-				+2.2
1,017,165	-				-2.7
1,017,165	-				-3.0
1,017,166	+				+2.3
1,017,167	-				+0.1
1,017,185	-				-0.2
1,017,222	+				-0.9
1,017,222	+				-0.4
1,017,222	+				-0.0
1,017,222	+				+1.3
1,017,258	+				-2.7
1,017,258	+				-2.4
1,017,258	+				+1.3
1,017,259	-				-1.2
1,017,259	-				+2.1
1,017,259	-				+1.7
1,017,259	-				-0.7
1,017,259	-				+1.1
1,017,262	+				-3.0
1,017,262	+				-0.4
1,017,262	+				+0.6
1,017,262	+				+2.2
1,017,262	+				+2.0
1,017,262	+				+1.3
1,017,262	+				+1.3
1,017,262	+				+1.4
1,017,262	+				-0.7
1,017,263	-				-0.9
1,017,263	-				-1.3
1,017,263	-				-1.0
1,017,263	-				-1.2
1,017,263	-				-2.5
1,017,263	-				-0.6
1,017,263	-				-0.1
1,017,263	-				-0.9
1,017,274	-				+1.3
1,017,309	+		AO356_04495	0.20	-0.6
1,017,351	+		AO356_04495	0.36	+1.0
1,017,351	+		AO356_04495	0.36	-1.5
1,017,352	-		AO356_04495	0.36	+3.0
1,017,352	-		AO356_04495	0.36	-1.1
1,017,352	-		AO356_04495	0.36	-0.4
1,017,378	-		AO356_04495	0.45	-2.7
1,017,476	+		AO356_04495	0.81	-1.3
1,017,476	+		AO356_04495	0.81	+0.9
1,017,476	+		AO356_04495	0.81	-2.5
1,017,477	-		AO356_04495	0.81	+0.0
1,017,477	-		AO356_04495	0.81	-2.3
1,017,526	+				-2.7
1,017,526	+				-2.9
1,017,527	-				-2.1
1,017,527	-				-1.3
1,017,527	-				-0.6
1,017,537	+				+0.8
1,017,537	+				+0.3
1,017,537	+				-2.5
1,017,537	+				+0.6
1,017,544	-				-0.7
1,017,663	+				+1.6
1,017,677	+				+0.6
1,017,678	-				+0.1
1,017,678	-				+0.5
1,017,678	-				-1.3
1,017,678	-				-2.0
1,017,699	+				-0.0
1,017,699	+				-2.6
1,017,699	+				-2.3
1,017,699	+				+1.7
1,017,730	+				-0.5
1,017,730	+				-0.5
1,017,730	+				+0.0
1,017,730	+				+0.2
1,017,731	-				-2.3
1,017,731	-				-1.7
1,017,788	+				+1.4
1,017,854	-		AO356_04500	0.18	+0.1
1,017,874	+		AO356_04500	0.24	+1.6
1,017,874	+		AO356_04500	0.24	+0.6
1,017,875	-		AO356_04500	0.25	-1.7
1,017,917	+		AO356_04500	0.38	+1.7
1,017,917	+		AO356_04500	0.38	+0.1
1,017,917	+		AO356_04500	0.38	+2.4
1,017,917	+		AO356_04500	0.38	-1.7
1,017,918	-		AO356_04500	0.39	+0.6
1,017,918	-		AO356_04500	0.39	+0.6
1,017,918	-		AO356_04500	0.39	-0.7
1,017,918	-		AO356_04500	0.39	+0.1