Experiment: copper (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_02580 and AO356_02585 are separated by 355 nucleotides AO356_02585 and AO356_02590 are separated by 169 nucleotides AO356_02590 and AO356_02595 are separated by 231 nucleotides
AO356_02580: AO356_02580 - GntR family transcriptional regulator, at 566,294 to 567,058
_02580
AO356_02585: AO356_02585 - hypothetical protein, at 567,414 to 568,604
_02585
AO356_02590: AO356_02590 - hypothetical protein, at 568,774 to 569,118
_02590
AO356_02595: AO356_02595 - D-alanyl-D-alanine carboxypeptidase, at 569,350 to 570,816
_02595
Position (kb) 567
568
569 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 566.520 kb on + strand, within AO356_02580 at 566.968 kb on + strand, within AO356_02580 at 566.968 kb on + strand, within AO356_02580 at 566.976 kb on + strand, within AO356_02580 at 566.976 kb on + strand, within AO356_02580 at 566.976 kb on + strand, within AO356_02580 at 566.977 kb on - strand, within AO356_02580 at 566.977 kb on - strand, within AO356_02580 at 566.977 kb on - strand, within AO356_02580 at 567.013 kb on + strand at 567.102 kb on + strand at 567.102 kb on + strand at 567.105 kb on + strand at 567.130 kb on + strand at 567.131 kb on - strand at 567.155 kb on + strand at 567.184 kb on - strand at 567.184 kb on - strand at 567.184 kb on - strand at 567.208 kb on - strand at 567.235 kb on - strand at 567.235 kb on - strand at 567.235 kb on - strand at 567.241 kb on - strand at 567.241 kb on - strand at 567.241 kb on - strand at 567.386 kb on + strand at 567.386 kb on + strand at 567.387 kb on - strand at 567.387 kb on - strand at 567.387 kb on - strand at 567.391 kb on + strand at 567.391 kb on + strand at 567.391 kb on + strand at 567.391 kb on + strand at 567.391 kb on + strand at 567.391 kb on + strand at 567.392 kb on - strand at 567.392 kb on - strand at 567.392 kb on - strand at 567.392 kb on - strand at 567.392 kb on - strand at 567.392 kb on - strand at 567.392 kb on - strand at 567.392 kb on - strand at 567.392 kb on - strand at 567.392 kb on - strand at 567.392 kb on - strand at 567.393 kb on + strand at 567.393 kb on + strand at 567.394 kb on - strand at 567.394 kb on - strand at 567.455 kb on + strand at 567.709 kb on - strand, within AO356_02585 at 567.729 kb on + strand, within AO356_02585 at 567.729 kb on + strand, within AO356_02585 at 567.729 kb on + strand, within AO356_02585 at 567.729 kb on + strand, within AO356_02585 at 567.729 kb on + strand, within AO356_02585 at 567.730 kb on - strand, within AO356_02585 at 567.730 kb on - strand, within AO356_02585 at 567.730 kb on - strand, within AO356_02585 at 567.731 kb on + strand, within AO356_02585 at 567.731 kb on + strand, within AO356_02585 at 567.731 kb on + strand, within AO356_02585 at 567.731 kb on + strand, within AO356_02585 at 567.731 kb on + strand, within AO356_02585 at 567.731 kb on + strand, within AO356_02585 at 567.731 kb on + strand, within AO356_02585 at 567.732 kb on - strand, within AO356_02585 at 567.732 kb on - strand, within AO356_02585 at 567.732 kb on - strand, within AO356_02585 at 567.732 kb on - strand, within AO356_02585 at 567.732 kb on - strand, within AO356_02585 at 567.732 kb on - strand, within AO356_02585 at 567.733 kb on + strand, within AO356_02585 at 567.733 kb on + strand, within AO356_02585 at 567.733 kb on + strand, within AO356_02585 at 567.733 kb on + strand, within AO356_02585 at 567.733 kb on + strand, within AO356_02585 at 567.733 kb on + strand, within AO356_02585 at 567.733 kb on + strand, within AO356_02585 at 567.733 kb on + strand, within AO356_02585 at 567.734 kb on - strand, within AO356_02585 at 567.734 kb on - strand, within AO356_02585 at 567.734 kb on - strand, within AO356_02585 at 567.734 kb on - strand, within AO356_02585 at 567.734 kb on - strand, within AO356_02585 at 567.912 kb on + strand, within AO356_02585 at 567.912 kb on + strand, within AO356_02585 at 567.913 kb on - strand, within AO356_02585 at 568.085 kb on + strand, within AO356_02585 at 568.085 kb on + strand, within AO356_02585 at 568.155 kb on + strand, within AO356_02585 at 568.156 kb on - strand, within AO356_02585 at 568.194 kb on - strand, within AO356_02585 at 568.302 kb on + strand, within AO356_02585 at 568.303 kb on - strand, within AO356_02585 at 568.705 kb on + strand at 568.932 kb on - strand, within AO356_02590 at 568.932 kb on - strand, within AO356_02590 at 569.133 kb on + strand at 569.133 kb on + strand at 569.134 kb on - strand at 569.134 kb on - strand at 569.134 kb on - strand at 569.134 kb on - strand at 569.134 kb on - strand at 569.137 kb on + strand at 569.137 kb on + strand at 569.137 kb on + strand at 569.137 kb on + strand at 569.137 kb on + strand at 569.137 kb on + strand at 569.138 kb on - strand at 569.138 kb on - strand at 569.138 kb on - strand at 569.138 kb on - strand at 569.138 kb on - strand at 569.156 kb on - strand at 569.266 kb on + strand at 569.266 kb on + strand at 569.266 kb on + strand at 569.266 kb on + strand at 569.267 kb on - strand at 569.334 kb on + strand at 569.343 kb on - strand at 569.343 kb on - strand at 569.343 kb on - strand at 569.546 kb on - strand, within AO356_02595 at 569.546 kb on - strand, within AO356_02595 at 569.599 kb on + strand, within AO356_02595 at 569.600 kb on - strand, within AO356_02595
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2.5 mM remove 566,520 + AO356_02580 0.30 +0.2 566,968 + AO356_02580 0.88 -0.3 566,968 + AO356_02580 0.88 -0.4 566,976 + AO356_02580 0.89 +0.4 566,976 + AO356_02580 0.89 +0.2 566,976 + AO356_02580 0.89 -0.5 566,977 - AO356_02580 0.89 -1.4 566,977 - AO356_02580 0.89 +0.9 566,977 - AO356_02580 0.89 +1.9 567,013 + +0.0 567,102 + +0.9 567,102 + +2.5 567,105 + +1.0 567,130 + +0.3 567,131 - +0.7 567,155 + +0.6 567,184 - +0.4 567,184 - +0.9 567,184 - -0.2 567,208 - +2.7 567,235 - -0.6 567,235 - -1.8 567,235 - -1.4 567,241 - -0.7 567,241 - +1.7 567,241 - +0.4 567,386 + -3.3 567,386 + -0.8 567,387 - +0.1 567,387 - +0.7 567,387 - +0.0 567,391 + +1.0 567,391 + +0.2 567,391 + -2.0 567,391 + +1.2 567,391 + +2.1 567,391 + -0.3 567,392 - +1.9 567,392 - +1.2 567,392 - -0.1 567,392 - -0.1 567,392 - -0.5 567,392 - -0.6 567,392 - +0.3 567,392 - +0.6 567,392 - +1.5 567,392 - -2.0 567,392 - +1.0 567,393 + -2.4 567,393 + -2.7 567,394 - -1.3 567,394 - -2.4 567,455 + +0.2 567,709 - AO356_02585 0.25 +0.2 567,729 + AO356_02585 0.26 -0.7 567,729 + AO356_02585 0.26 +1.0 567,729 + AO356_02585 0.26 -0.8 567,729 + AO356_02585 0.26 -0.8 567,729 + AO356_02585 0.26 +3.2 567,730 - AO356_02585 0.27 +1.9 567,730 - AO356_02585 0.27 +0.7 567,730 - AO356_02585 0.27 +0.4 567,731 + AO356_02585 0.27 -0.2 567,731 + AO356_02585 0.27 +0.7 567,731 + AO356_02585 0.27 +0.3 567,731 + AO356_02585 0.27 +0.3 567,731 + AO356_02585 0.27 +0.3 567,731 + AO356_02585 0.27 +0.2 567,731 + AO356_02585 0.27 +0.3 567,732 - AO356_02585 0.27 +0.9 567,732 - AO356_02585 0.27 -0.8 567,732 - AO356_02585 0.27 +1.3 567,732 - AO356_02585 0.27 -1.8 567,732 - AO356_02585 0.27 +1.1 567,732 - AO356_02585 0.27 -1.8 567,733 + AO356_02585 0.27 +1.2 567,733 + AO356_02585 0.27 +1.7 567,733 + AO356_02585 0.27 +0.2 567,733 + AO356_02585 0.27 -2.0 567,733 + AO356_02585 0.27 +1.0 567,733 + AO356_02585 0.27 +1.7 567,733 + AO356_02585 0.27 -0.3 567,733 + AO356_02585 0.27 -1.8 567,734 - AO356_02585 0.27 -1.2 567,734 - AO356_02585 0.27 +0.9 567,734 - AO356_02585 0.27 -0.1 567,734 - AO356_02585 0.27 -1.3 567,734 - AO356_02585 0.27 -0.4 567,912 + AO356_02585 0.42 +1.0 567,912 + AO356_02585 0.42 -1.8 567,913 - AO356_02585 0.42 +3.6 568,085 + AO356_02585 0.56 -1.8 568,085 + AO356_02585 0.56 -0.3 568,155 + AO356_02585 0.62 +2.9 568,156 - AO356_02585 0.62 +1.6 568,194 - AO356_02585 0.65 +1.2 568,302 + AO356_02585 0.75 +0.5 568,303 - AO356_02585 0.75 -0.8 568,705 + -0.0 568,932 - AO356_02590 0.46 +0.2 568,932 - AO356_02590 0.46 -0.4 569,133 + +1.2 569,133 + -1.4 569,134 - +0.6 569,134 - -3.2 569,134 - -1.1 569,134 - -0.7 569,134 - -1.8 569,137 + -0.5 569,137 + -0.3 569,137 + +0.6 569,137 + +1.0 569,137 + -2.0 569,137 + +1.5 569,138 - -0.6 569,138 - +0.5 569,138 - -1.5 569,138 - -2.4 569,138 - -0.8 569,156 - -2.2 569,266 + +1.4 569,266 + +2.0 569,266 + +1.1 569,266 + -0.8 569,267 - -1.0 569,334 + +0.8 569,343 - -0.0 569,343 - -0.8 569,343 - -1.1 569,546 - AO356_02595 0.13 -0.1 569,546 - AO356_02595 0.13 +4.1 569,599 + AO356_02595 0.17 +0.4 569,600 - AO356_02595 0.17 +1.2
Or see this region's nucleotide sequence