Strain Fitness in Sinorhizobium meliloti 1021 around SMc03827
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
3,493,053 | + | SMc03826 | 0.49 | +5.7 | |
3,493,053 | + | SMc03826 | 0.49 | +5.8 | |
3,493,482 | + | SMc03826 | 0.84 | +5.5 | |
3,493,482 | + | SMc03826 | 0.84 | +5.5 | |
3,493,483 | - | SMc03826 | 0.84 | +6.3 | |
3,493,746 | - | +0.4 | |||
3,494,055 | + | SMc03827 | 0.26 | -0.5 | |
3,494,056 | - | SMc03827 | 0.27 | -0.9 | |
3,494,056 | - | SMc03827 | 0.27 | +0.6 | |
3,494,140 | + | SMc03827 | 0.40 | -0.2 | |
3,494,141 | - | SMc03827 | 0.40 | +0.3 | |
3,494,147 | + | SMc03827 | 0.41 | +0.0 | |
3,494,217 | + | SMc03827 | 0.52 | -1.1 | |
3,494,373 | - | SMc03827 | 0.76 | -0.7 | |
3,494,589 | + | -0.2 | |||
3,495,493 | + | +0.4 | |||
3,495,493 | + | -0.3 | |||
3,495,493 | + | +0.2 | |||
3,495,494 | - | -1.4 | |||
3,495,495 | + | +0.2 | |||
3,495,495 | + | -0.1 | |||
3,495,495 | + | -0.3 | |||
3,495,495 | + | -0.2 | |||
3,495,496 | - | +0.4 | |||
3,495,496 | - | +0.1 |
Or see this region's nucleotide sequence