Strain Fitness in Sinorhizobium meliloti 1021 around SMc03139

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,190,747	-		SMc03140	0.27	-0.6
3,190,749	-		SMc03140	0.28	-0.0
3,190,793	+		SMc03140	0.34	-1.0
3,190,827	-		SMc03140	0.38	-1.6
3,190,827	-		SMc03140	0.38	-1.9
3,190,838	+		SMc03140	0.40	-2.1
3,190,838	+		SMc03140	0.40	-0.7
3,191,084	+		SMc03140	0.73	-1.0
3,191,084	+		SMc03140	0.73	-2.1
3,191,107	+		SMc03140	0.77	-1.0
3,191,107	+		SMc03140	0.77	-1.2
3,191,239	+				-0.9
3,191,239	+				-0.2
3,191,240	-				-1.2
3,191,353	+				+0.4
3,191,358	+				+1.5
3,191,360	+				+0.1
3,191,361	-				+0.3
3,191,991	+		SMc03139	0.49	-0.6
3,191,991	+		SMc03139	0.49	-0.8
3,191,992	-		SMc03139	0.49	-1.1
3,191,992	-		SMc03139	0.49	+1.1
3,192,055	-		SMc03139	0.55	-0.2
3,192,102	+		SMc03139	0.60	-1.4
3,192,103	-		SMc03139	0.60	-0.6
3,192,147	+		SMc03139	0.64	-0.8
3,192,147	+		SMc03139	0.64	-0.4
3,192,147	+		SMc03139	0.64	-1.0
3,192,148	-		SMc03139	0.64	-2.1
3,192,151	-		SMc03139	0.65	-0.6
3,192,151	-		SMc03139	0.65	-0.4
3,192,151	-		SMc03139	0.65	-0.2
3,192,324	+		SMc03139	0.82	+0.0
3,192,325	-		SMc03139	0.82	-1.0
3,192,388	+		SMc03139	0.88	-0.7
3,192,389	-		SMc03139	0.88	-0.4
3,192,490	-				+0.6
3,192,504	+				-0.9
3,192,505	-				+0.0
3,192,529	+				-0.0
3,192,530	-				-0.3
3,192,530	-				+0.4
3,192,530	-				+0.2
3,192,530	-				+0.4
3,192,530	-				-0.0
3,192,661	+				-0.3
3,192,662	-				-0.7
3,192,833	-		SMc03138	0.30	-1.2
3,192,833	-		SMc03138	0.30	-0.1
3,192,833	-		SMc03138	0.30	-0.5
3,192,849	+		SMc03138	0.32	-0.0
3,192,850	-		SMc03138	0.32	+0.0
3,192,958	-		SMc03138	0.45	-1.3
3,192,999	-		SMc03138	0.50	-0.2
3,192,999	-		SMc03138	0.50	+0.0
3,193,501	+		SMc03137	0.17	-0.8
3,193,502	-		SMc03137	0.17	+0.4