Strain Fitness in Sinorhizobium meliloti 1021 around SMc02049

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,669,661	+		SMc02050	0.71	+5.2
1,669,815	-		SMc02050	0.81	+4.5
1,670,303	+				+0.2
1,670,443	+				-0.3
1,670,444	-				-0.5
1,670,477	-				-0.2
1,670,565	-				-0.5
1,670,861	-		SMc02049	0.17	-0.6
1,670,861	-		SMc02049	0.17	-0.3
1,670,872	+		SMc02049	0.17	-0.7
1,670,872	+		SMc02049	0.17	-0.7
1,670,899	+		SMc02049	0.18	+0.1
1,670,900	-		SMc02049	0.18	-0.4
1,670,900	-		SMc02049	0.18	-0.2
1,670,965	+		SMc02049	0.20	+0.3
1,670,965	+		SMc02049	0.20	-1.1
1,670,966	-		SMc02049	0.20	+0.9
1,670,966	-		SMc02049	0.20	-0.2
1,670,966	-		SMc02049	0.20	+0.6
1,671,221	-		SMc02049	0.29	-1.0
1,671,239	+		SMc02049	0.30	+0.8
1,671,240	-		SMc02049	0.30	+0.7
1,671,240	-		SMc02049	0.30	-1.5
1,671,240	-		SMc02049	0.30	+0.2
1,671,331	+		SMc02049	0.33	-0.7
1,671,331	+		SMc02049	0.33	-0.0
1,671,332	-		SMc02049	0.33	+0.0
1,671,332	-		SMc02049	0.33	+0.6
1,671,363	-		SMc02049	0.34	+0.4
1,671,495	-		SMc02049	0.39	-1.1
1,671,499	+		SMc02049	0.39	-0.1
1,671,500	-		SMc02049	0.39	-0.1
1,671,526	+		SMc02049	0.40	-0.9
1,671,527	-		SMc02049	0.40	-0.6
1,671,527	-		SMc02049	0.40	-1.2
1,671,527	-		SMc02049	0.40	-0.1
1,671,784	+		SMc02049	0.49	-0.1
1,671,784	+		SMc02049	0.49	-0.1
1,671,784	+		SMc02049	0.49	-1.2
1,671,815	+		SMc02049	0.50	-0.5
1,671,815	+		SMc02049	0.50	-0.3
1,671,816	-		SMc02049	0.50	+0.1
1,671,839	-		SMc02049	0.51	+0.5
1,671,875	-		SMc02049	0.52	+0.5
1,672,003	-		SMc02049	0.57	+0.3
1,672,068	-		SMc02049	0.59	-0.5
1,672,094	+		SMc02049	0.60	-0.8
1,672,192	+		SMc02049	0.63	+1.9
1,672,192	+		SMc02049	0.63	-1.1
1,672,192	+		SMc02049	0.63	-0.5
1,672,192	+		SMc02049	0.63	-0.3
1,672,193	-		SMc02049	0.63	+0.2
1,672,230	-		SMc02049	0.65	-1.2
1,672,262	+		SMc02049	0.66	-0.9
1,672,355	+		SMc02049	0.69	-0.3
1,672,355	+		SMc02049	0.69	-0.5
1,672,356	-		SMc02049	0.69	-1.1
1,672,357	+		SMc02049	0.69	-1.2
1,672,357	+		SMc02049	0.69	-0.5
1,672,376	+		SMc02049	0.70	+0.2
1,672,377	-		SMc02049	0.70	+0.3
1,672,377	-		SMc02049	0.70	-0.6
1,672,377	-		SMc02049	0.70	-0.7
1,672,378	+		SMc02049	0.70	-0.7
1,672,378	+		SMc02049	0.70	+0.6
1,672,378	+		SMc02049	0.70	+0.2
1,672,379	-		SMc02049	0.70	+0.3
1,672,379	-		SMc02049	0.70	-0.4
1,672,568	-		SMc02049	0.76	+0.2
1,672,843	+		SMc02049	0.86	+0.3
1,672,843	+		SMc02049	0.86	+0.5
1,672,843	+		SMc02049	0.86	-0.5
1,672,889	-		SMc02049	0.88	+0.3
1,672,896	-		SMc02049	0.88	+5.5
1,672,896	-		SMc02049	0.88	+0.9
1,672,896	-		SMc02049	0.88	-0.1
1,672,906	+		SMc02049	0.88	+0.5
1,672,963	+				+0.2
1,673,107	-				+0.1
1,673,107	-				-0.6
1,673,209	+				-0.0
1,673,210	-				-0.1
1,673,210	-				+1.1
1,673,222	+				-0.1
1,673,415	+		SMc02048	0.47	-0.2
1,673,415	+		SMc02048	0.47	-0.6
1,673,416	-		SMc02048	0.48	-0.4
1,673,605	+				-0.8
1,673,605	+				+0.7
1,673,606	-				-0.2
1,673,632	+				+0.6
1,673,633	-				-0.1
1,673,677	+				-0.4
1,673,677	+				-0.1
1,673,678	-				+0.9
1,673,678	-				+0.7
1,673,678	-				-2.1
1,673,678	-				-0.1
1,673,737	+		SMc02047	0.10	-1.4
1,674,009	-		SMc02047	0.34	+0.1
1,674,032	-		SMc02047	0.36	+0.5
1,674,150	+		SMc02047	0.46	-0.2
1,674,176	-		SMc02047	0.49	-0.3