Strain Fitness in Sinorhizobium meliloti 1021 around SMc01868
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,341,321 | - | SMc01869 | 0.38 | +1.3 | |
2,341,476 | + | SMc01869 | 0.49 | -0.7 | |
2,341,477 | - | SMc01869 | 0.50 | -0.6 | |
2,341,477 | - | SMc01869 | 0.50 | -0.1 | |
2,341,588 | + | SMc01869 | 0.58 | +0.2 | |
2,341,624 | + | SMc01869 | 0.61 | -0.7 | |
2,341,629 | + | SMc01869 | 0.61 | -0.5 | |
2,341,630 | - | SMc01869 | 0.61 | -2.2 | |
2,341,678 | - | SMc01869 | 0.65 | -0.3 | |
2,341,702 | + | SMc01869 | 0.67 | -0.0 | |
2,341,702 | + | SMc01869 | 0.67 | +0.1 | |
2,341,703 | - | SMc01869 | 0.67 | -0.0 | |
2,341,790 | - | SMc01869 | 0.73 | +1.6 | |
2,341,906 | - | SMc01869 | 0.82 | -0.2 | |
2,341,906 | - | SMc01869 | 0.82 | -0.2 | |
2,342,043 | + | +1.5 | |||
2,342,043 | + | -0.8 | |||
2,342,043 | + | +0.3 | |||
2,342,043 | + | +0.8 | |||
2,342,068 | - | -0.6 | |||
2,342,068 | - | +0.6 | |||
2,342,147 | - | -0.4 | |||
2,342,147 | - | -0.4 |
Or see this region's nucleotide sequence