Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00965 and SMc00964 are separated by 4 nucleotides SMc00964 and SMc00963 are separated by 31 nucleotides SMc00963 and SMc00962 overlap by 7 nucleotides SMc00962 and SMc00961 are separated by 133 nucleotides
SMc00965: SMc00965 - hypothetical protein, at 974,919 to 976,415
SMc00965
SMc00964: SMc00964 - hypothetical protein, at 976,420 to 976,983
SMc00964
SMc00963: SMc00963 - hypothetical protein, at 977,015 to 977,620
SMc00963
SMc00962: SMc00962 - ABC transporter ATP-binding protein, at 977,614 to 978,294
SMc00962
SMc00961: SMc00961 - hypothetical protein, at 978,428 to 979,627
SMc00961
Position (kb) 977
978 Strain fitness (log2 ratio) -2
-1
0
1 at 976.122 kb on + strand, within SMc00965 at 976.983 kb on + strand at 976.983 kb on + strand at 976.983 kb on + strand at 976.983 kb on + strand at 976.984 kb on - strand at 976.984 kb on - strand at 976.985 kb on + strand at 976.985 kb on + strand at 976.985 kb on + strand at 976.986 kb on - strand at 976.986 kb on - strand at 976.986 kb on - strand at 976.986 kb on - strand at 976.992 kb on - strand at 976.992 kb on - strand at 976.992 kb on - strand at 977.001 kb on + strand at 977.002 kb on - strand at 977.017 kb on - strand at 977.158 kb on - strand, within SMc00963 at 977.265 kb on - strand, within SMc00963 at 977.402 kb on + strand, within SMc00963 at 977.403 kb on - strand, within SMc00963 at 977.466 kb on + strand, within SMc00963 at 977.604 kb on + strand at 977.605 kb on - strand at 977.605 kb on - strand at 977.605 kb on - strand at 978.330 kb on + strand at 978.331 kb on - strand at 978.333 kb on - strand at 978.333 kb on - strand at 978.348 kb on + strand at 978.349 kb on - strand at 978.360 kb on + strand at 978.361 kb on - strand at 978.372 kb on + strand at 978.372 kb on + strand at 978.372 kb on + strand at 978.373 kb on - strand at 978.373 kb on - strand at 978.373 kb on - strand at 978.373 kb on - strand at 978.373 kb on - strand at 978.378 kb on + strand at 978.378 kb on + strand at 978.378 kb on + strand at 978.378 kb on + strand at 978.378 kb on + strand at 978.378 kb on + strand at 978.378 kb on + strand at 978.379 kb on - strand at 978.379 kb on - strand at 978.379 kb on - strand at 978.570 kb on + strand, within SMc00961 at 978.570 kb on + strand, within SMc00961 at 978.570 kb on + strand, within SMc00961 at 978.571 kb on - strand, within SMc00961
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 976,122 + SMc00965 0.80 -0.2 976,983 + -0.5 976,983 + -0.6 976,983 + +0.2 976,983 + +0.3 976,984 - +0.2 976,984 - -0.3 976,985 + -1.2 976,985 + -0.8 976,985 + -0.9 976,986 - +1.3 976,986 - +0.4 976,986 - -1.6 976,986 - -0.2 976,992 - +0.4 976,992 - -0.8 976,992 - -0.7 977,001 + -0.3 977,002 - -0.9 977,017 - -0.1 977,158 - SMc00963 0.24 -0.4 977,265 - SMc00963 0.41 -1.9 977,402 + SMc00963 0.64 -2.7 977,403 - SMc00963 0.64 -0.8 977,466 + SMc00963 0.74 -2.2 977,604 + -2.1 977,605 - -0.3 977,605 - +0.3 977,605 - -0.5 978,330 + -0.7 978,331 - +0.5 978,333 - -0.6 978,333 - +1.1 978,348 + -2.4 978,349 - -0.0 978,360 + -2.7 978,361 - -0.1 978,372 + -1.6 978,372 + -1.2 978,372 + -0.1 978,373 - +0.3 978,373 - -0.1 978,373 - +0.0 978,373 - +0.4 978,373 - -1.2 978,378 + -0.0 978,378 + +0.3 978,378 + -0.6 978,378 + -0.2 978,378 + +0.4 978,378 + +0.2 978,378 + -0.1 978,379 - -0.2 978,379 - -1.4 978,379 - +1.2 978,570 + SMc00961 0.12 +0.1 978,570 + SMc00961 0.12 -0.0 978,570 + SMc00961 0.12 -0.1 978,571 - SMc00961 0.12 -1.6
Or see this region's nucleotide sequence