Strain Fitness in Sinorhizobium meliloti 1021 around SMc00560
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,229,536 | + | SMc00558 | 0.90 | -0.3 | |
1,229,537 | - | SMc00558 | 0.90 | -0.0 | |
1,229,661 | + | -0.1 | |||
1,229,662 | - | +0.2 | |||
1,229,662 | - | +0.1 | |||
1,229,730 | + | -0.9 | |||
1,229,743 | - | +0.2 | |||
1,230,071 | + | SMc00559 | 0.49 | -0.5 | |
1,230,072 | - | SMc00559 | 0.50 | +0.6 | |
1,230,072 | - | SMc00559 | 0.50 | -0.4 | |
1,230,155 | + | SMc00559 | 0.60 | +0.3 | |
1,230,180 | - | SMc00559 | 0.64 | -1.5 | |
1,230,180 | - | SMc00559 | 0.64 | +0.6 | |
1,230,386 | + | -0.3 | |||
1,230,387 | - | +0.0 | |||
1,230,387 | - | +0.5 | |||
1,230,558 | - | SMc00560 | 0.33 | -1.9 | |
1,230,558 | - | SMc00560 | 0.33 | -0.8 | |
1,230,757 | + | -0.0 | |||
1,230,922 | - | +0.4 |
Or see this region's nucleotide sequence