Strain Fitness in Sinorhizobium meliloti 1021 around SMc00290

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,858,926	+		SMc00288	0.81	+0.0
1,858,927	-		SMc00288	0.81	+2.0
1,858,927	-		SMc00288	0.81	-0.5
1,858,927	-		SMc00288	0.81	+0.1
1,859,000	+				+0.1
1,859,000	+				+0.8
1,859,700	-				-0.2
1,859,718	+				-0.3
1,859,718	+				+0.3
1,859,719	-				+0.9
1,859,719	-				-0.0
1,859,720	+				-0.5
1,859,720	+				-1.6
1,859,720	+				-2.0
1,859,721	-				+0.9
1,859,721	-				+0.5
1,859,759	+				-0.2
1,859,759	+				-1.3
1,859,760	-				-0.7
1,859,760	-				-0.2
1,859,760	-				-0.3
1,859,760	-				-0.3
1,859,761	+				-0.3
1,859,762	-				+0.6
1,859,762	-				+0.5
1,859,762	-				+0.1
1,859,801	+				-0.5
1,859,809	+				-0.3
1,859,809	+				-0.4
1,859,809	+				+0.5
1,859,809	+				+0.1
1,859,809	+				-0.6
1,859,810	-				+0.3
1,859,852	+		SMc00290	0.13	+2.9
1,859,987	+		SMc00290	0.44	-0.2
1,859,987	+		SMc00290	0.44	+0.9
1,859,988	-		SMc00290	0.44	-1.6
1,859,988	-		SMc00290	0.44	+0.1
1,859,989	+		SMc00290	0.44	+0.4
1,859,989	+		SMc00290	0.44	-0.1
1,859,989	+		SMc00290	0.44	-0.6
1,859,990	-		SMc00290	0.44	-0.3
1,859,990	-		SMc00290	0.44	+8.1
1,859,990	-		SMc00290	0.44	-0.5
1,859,990	-		SMc00290	0.44	-0.2
1,859,990	-		SMc00290	0.44	+0.2
1,860,008	+		SMc00290	0.48	-1.9
1,860,041	+		SMc00290	0.56	-0.0
1,860,055	+		SMc00290	0.59	+1.6
1,860,055	+		SMc00290	0.59	+0.5
1,860,055	+		SMc00290	0.59	+0.1
1,860,055	+		SMc00290	0.59	+0.4
1,860,056	-		SMc00290	0.59	+0.1
1,860,056	-		SMc00290	0.59	+0.9
1,860,059	+		SMc00290	0.60	+0.1
1,860,059	+		SMc00290	0.60	+0.2
1,860,059	+		SMc00290	0.60	-0.2
1,860,059	+		SMc00290	0.60	-0.3
1,860,059	+		SMc00290	0.60	+0.0
1,860,059	+		SMc00290	0.60	+0.1
1,860,060	-		SMc00290	0.60	+0.2
1,860,060	-		SMc00290	0.60	+0.9
1,860,367	+				-0.3
1,860,368	-				-1.0
1,860,368	-				+0.1
1,860,370	-				-0.2
1,860,424	+				-0.1
1,860,486	-				-0.2
1,860,487	+				-1.1
1,860,517	-				+0.0
1,860,556	+				+2.1
1,860,649	-				+0.5
1,861,053	-		SMc00291	0.32	+0.8
1,861,226	-		SMc00291	0.45	+0.0