Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21327 and SM_b21328 are separated by 45 nucleotides SM_b21328 and SM_b21329 are separated by 58 nucleotides SM_b21329 and SM_b21330 are separated by 215 nucleotides SM_b21330 and SM_b21331 are separated by 231 nucleotides
SM_b21327: SM_b21327 - dTDP-4-dehydrorhamnose reductase, at 996,326 to 997,228
_b21327
SM_b21328: SM_b21328 - Sir2-like transcriptional silencer protein, at 997,274 to 998,092
_b21328
SM_b21329: SM_b21329 - hypothetical protein, at 998,151 to 998,321
_b21329
SM_b21330: SM_b21330 - hypothetical protein, at 998,537 to 998,746
_b21330
SM_b21331: SM_b21331 - hypothetical protein, at 998,978 to 999,298
_b21331
Position (kb) 998
999 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 997.227 kb on - strand at 997.416 kb on + strand, within SM_b21328 at 997.416 kb on + strand, within SM_b21328 at 997.416 kb on + strand, within SM_b21328 at 997.416 kb on + strand, within SM_b21328 at 997.416 kb on + strand, within SM_b21328 at 997.417 kb on - strand, within SM_b21328 at 997.417 kb on - strand, within SM_b21328 at 997.417 kb on - strand, within SM_b21328 at 997.644 kb on + strand, within SM_b21328 at 997.645 kb on - strand, within SM_b21328 at 997.710 kb on + strand, within SM_b21328 at 997.710 kb on + strand, within SM_b21328 at 997.732 kb on - strand, within SM_b21328 at 997.732 kb on - strand, within SM_b21328 at 997.755 kb on + strand, within SM_b21328 at 997.755 kb on + strand, within SM_b21328 at 997.756 kb on - strand, within SM_b21328 at 997.767 kb on + strand, within SM_b21328 at 997.768 kb on - strand, within SM_b21328 at 997.917 kb on + strand, within SM_b21328 at 998.132 kb on - strand at 998.152 kb on + strand at 998.153 kb on - strand at 998.303 kb on + strand, within SM_b21329 at 998.303 kb on + strand, within SM_b21329 at 998.304 kb on - strand, within SM_b21329 at 998.314 kb on + strand at 998.314 kb on + strand at 998.422 kb on + strand at 998.532 kb on + strand at 998.533 kb on - strand at 998.697 kb on + strand, within SM_b21330 at 998.698 kb on - strand, within SM_b21330 at 998.720 kb on + strand, within SM_b21330 at 998.836 kb on + strand at 998.837 kb on - strand at 998.887 kb on + strand at 998.887 kb on + strand at 998.887 kb on + strand at 998.887 kb on + strand at 998.888 kb on - strand at 998.888 kb on - strand at 998.888 kb on - strand at 999.011 kb on - strand, within SM_b21331 at 999.011 kb on - strand, within SM_b21331 at 999.248 kb on + strand, within SM_b21331 at 999.248 kb on + strand, within SM_b21331 at 999.249 kb on - strand, within SM_b21331 at 999.250 kb on + strand, within SM_b21331
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 997,227 - +0.1 997,416 + SM_b21328 0.17 -0.4 997,416 + SM_b21328 0.17 +0.3 997,416 + SM_b21328 0.17 -0.9 997,416 + SM_b21328 0.17 -0.1 997,416 + SM_b21328 0.17 -0.5 997,417 - SM_b21328 0.17 -0.1 997,417 - SM_b21328 0.17 +0.0 997,417 - SM_b21328 0.17 +0.4 997,644 + SM_b21328 0.45 +0.6 997,645 - SM_b21328 0.45 -2.0 997,710 + SM_b21328 0.53 -0.2 997,710 + SM_b21328 0.53 +1.7 997,732 - SM_b21328 0.56 +0.5 997,732 - SM_b21328 0.56 -0.0 997,755 + SM_b21328 0.59 +0.3 997,755 + SM_b21328 0.59 -0.4 997,756 - SM_b21328 0.59 -0.5 997,767 + SM_b21328 0.60 +0.2 997,768 - SM_b21328 0.60 +0.4 997,917 + SM_b21328 0.79 -0.5 998,132 - +0.4 998,152 + +0.3 998,153 - -0.0 998,303 + SM_b21329 0.89 -1.3 998,303 + SM_b21329 0.89 -0.4 998,304 - SM_b21329 0.89 -1.1 998,314 + +4.6 998,314 + +0.5 998,422 + +0.3 998,532 + -1.1 998,533 - +0.1 998,697 + SM_b21330 0.76 +0.5 998,698 - SM_b21330 0.77 -0.0 998,720 + SM_b21330 0.87 +0.5 998,836 + -0.3 998,837 - -0.2 998,887 + -1.1 998,887 + +0.4 998,887 + -1.8 998,887 + -0.8 998,888 - -0.6 998,888 - -0.1 998,888 - +0.9 999,011 - SM_b21331 0.10 -1.1 999,011 - SM_b21331 0.10 -0.3 999,248 + SM_b21331 0.84 +0.7 999,248 + SM_b21331 0.84 -0.3 999,249 - SM_b21331 0.84 +0.2 999,250 + SM_b21331 0.85 -0.6
Or see this region's nucleotide sequence