Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21691 and SM_b20573 are separated by 88 nucleotides SM_b20573 and SM_b20574 are separated by 180 nucleotides SM_b20574 and SM_b20575 are separated by 13 nucleotides
SM_b21691: SM_b21691 - nitrilotriacetate monooxygenase subunit A, at 1,584,643 to 1,585,992
_b21691
SM_b20573: SM_b20573 - NADH-dependent FMN reductase, at 1,586,081 to 1,586,638
_b20573
SM_b20574: SM_b20574 - maltooligosyl trehalose synthase, at 1,586,819 to 1,589,446
_b20574
SM_b20575: SM_b20575 - 3-carboxy-cis,cis-muconate cycloisomerase, at 1,589,460 to 1,590,515
_b20575
Position (kb)
1586
1587
1588
1589
1590 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1585.941 kb on + strand at 1585.941 kb on + strand at 1586.209 kb on - strand, within SM_b20573 at 1586.379 kb on + strand, within SM_b20573 at 1586.379 kb on + strand, within SM_b20573 at 1586.379 kb on + strand, within SM_b20573 at 1586.379 kb on + strand, within SM_b20573 at 1586.379 kb on + strand, within SM_b20573 at 1586.380 kb on - strand, within SM_b20573 at 1586.380 kb on - strand, within SM_b20573 at 1586.380 kb on - strand, within SM_b20573 at 1586.380 kb on - strand, within SM_b20573 at 1586.380 kb on - strand, within SM_b20573 at 1586.445 kb on + strand, within SM_b20573 at 1586.446 kb on - strand, within SM_b20573 at 1586.446 kb on - strand, within SM_b20573 at 1586.446 kb on - strand, within SM_b20573 at 1586.446 kb on - strand, within SM_b20573 at 1586.602 kb on + strand at 1586.602 kb on + strand at 1586.602 kb on + strand at 1586.603 kb on - strand at 1586.603 kb on - strand at 1586.615 kb on - strand at 1586.645 kb on - strand at 1586.704 kb on + strand at 1586.721 kb on - strand at 1586.721 kb on - strand at 1586.840 kb on + strand at 1586.841 kb on - strand at 1586.927 kb on + strand at 1586.928 kb on - strand at 1586.973 kb on - strand at 1586.987 kb on + strand at 1586.987 kb on + strand at 1586.988 kb on - strand at 1586.989 kb on + strand at 1587.167 kb on + strand, within SM_b20574 at 1587.260 kb on + strand, within SM_b20574 at 1587.260 kb on + strand, within SM_b20574 at 1587.261 kb on - strand, within SM_b20574 at 1587.261 kb on - strand, within SM_b20574 at 1587.261 kb on - strand, within SM_b20574 at 1587.261 kb on - strand, within SM_b20574 at 1587.294 kb on - strand, within SM_b20574 at 1587.297 kb on - strand, within SM_b20574 at 1587.329 kb on + strand, within SM_b20574 at 1587.329 kb on + strand, within SM_b20574 at 1587.330 kb on - strand, within SM_b20574 at 1587.330 kb on - strand, within SM_b20574 at 1587.578 kb on + strand, within SM_b20574 at 1587.578 kb on + strand, within SM_b20574 at 1587.737 kb on + strand, within SM_b20574 at 1587.776 kb on + strand, within SM_b20574 at 1587.776 kb on + strand, within SM_b20574 at 1587.776 kb on + strand, within SM_b20574 at 1587.776 kb on + strand, within SM_b20574 at 1587.776 kb on + strand, within SM_b20574 at 1587.776 kb on + strand, within SM_b20574 at 1587.776 kb on + strand, within SM_b20574 at 1587.776 kb on + strand, within SM_b20574 at 1587.777 kb on - strand, within SM_b20574 at 1587.777 kb on - strand, within SM_b20574 at 1587.777 kb on - strand, within SM_b20574 at 1587.777 kb on - strand, within SM_b20574 at 1587.777 kb on - strand, within SM_b20574 at 1587.779 kb on - strand, within SM_b20574 at 1587.795 kb on + strand, within SM_b20574 at 1587.796 kb on - strand at 1587.862 kb on - strand, within SM_b20574 at 1587.989 kb on - strand, within SM_b20574 at 1587.989 kb on - strand, within SM_b20574 at 1588.105 kb on + strand, within SM_b20574 at 1588.106 kb on - strand, within SM_b20574 at 1588.112 kb on + strand, within SM_b20574 at 1588.113 kb on - strand, within SM_b20574 at 1588.165 kb on - strand, within SM_b20574 at 1588.165 kb on - strand, within SM_b20574 at 1588.334 kb on + strand, within SM_b20574 at 1588.468 kb on + strand, within SM_b20574 at 1588.790 kb on + strand, within SM_b20574 at 1588.791 kb on - strand, within SM_b20574 at 1588.951 kb on + strand, within SM_b20574 at 1588.955 kb on + strand, within SM_b20574 at 1588.955 kb on + strand, within SM_b20574 at 1588.955 kb on + strand, within SM_b20574 at 1588.955 kb on + strand, within SM_b20574 at 1589.097 kb on + strand, within SM_b20574 at 1589.108 kb on + strand, within SM_b20574 at 1589.348 kb on + strand at 1589.409 kb on + strand at 1589.410 kb on - strand at 1589.410 kb on - strand at 1590.177 kb on - strand, within SM_b20575
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,585,941 + -0.2 1,585,941 + -1.1 1,586,209 - SM_b20573 0.23 -0.3 1,586,379 + SM_b20573 0.53 +1.8 1,586,379 + SM_b20573 0.53 +0.4 1,586,379 + SM_b20573 0.53 +0.6 1,586,379 + SM_b20573 0.53 +0.0 1,586,379 + SM_b20573 0.53 +0.5 1,586,380 - SM_b20573 0.54 +0.3 1,586,380 - SM_b20573 0.54 -0.7 1,586,380 - SM_b20573 0.54 -0.1 1,586,380 - SM_b20573 0.54 -0.1 1,586,380 - SM_b20573 0.54 -0.8 1,586,445 + SM_b20573 0.65 +1.2 1,586,446 - SM_b20573 0.65 -0.3 1,586,446 - SM_b20573 0.65 +0.2 1,586,446 - SM_b20573 0.65 -0.4 1,586,446 - SM_b20573 0.65 +0.1 1,586,602 + -0.2 1,586,602 + +0.7 1,586,602 + -0.4 1,586,603 - -0.7 1,586,603 - -0.2 1,586,615 - +0.1 1,586,645 - +0.1 1,586,704 + +0.8 1,586,721 - -0.4 1,586,721 - -0.0 1,586,840 + -0.4 1,586,841 - -0.3 1,586,927 + +0.1 1,586,928 - +0.6 1,586,973 - -0.1 1,586,987 + +0.9 1,586,987 + -0.1 1,586,988 - +0.8 1,586,989 + +0.2 1,587,167 + SM_b20574 0.13 -0.7 1,587,260 + SM_b20574 0.17 -0.0 1,587,260 + SM_b20574 0.17 -0.1 1,587,261 - SM_b20574 0.17 +1.5 1,587,261 - SM_b20574 0.17 +0.3 1,587,261 - SM_b20574 0.17 +0.4 1,587,261 - SM_b20574 0.17 +0.4 1,587,294 - SM_b20574 0.18 -0.1 1,587,297 - SM_b20574 0.18 +0.8 1,587,329 + SM_b20574 0.19 +0.3 1,587,329 + SM_b20574 0.19 +0.2 1,587,330 - SM_b20574 0.19 +0.5 1,587,330 - SM_b20574 0.19 -0.7 1,587,578 + SM_b20574 0.29 -0.1 1,587,578 + SM_b20574 0.29 +4.7 1,587,737 + SM_b20574 0.35 -0.4 1,587,776 + SM_b20574 0.36 -0.6 1,587,776 + SM_b20574 0.36 +0.0 1,587,776 + SM_b20574 0.36 -0.2 1,587,776 + SM_b20574 0.36 -0.1 1,587,776 + SM_b20574 0.36 +0.4 1,587,776 + SM_b20574 0.36 +0.6 1,587,776 + SM_b20574 0.36 +0.1 1,587,776 + SM_b20574 0.36 +0.2 1,587,777 - SM_b20574 0.36 -0.8 1,587,777 - SM_b20574 0.36 +0.7 1,587,777 - SM_b20574 0.36 -0.8 1,587,777 - SM_b20574 0.36 +0.6 1,587,777 - SM_b20574 0.36 -0.4 1,587,779 - SM_b20574 0.37 -0.1 1,587,795 + SM_b20574 0.37 +0.2 1,587,796 - +0.1 1,587,862 - SM_b20574 0.40 +0.3 1,587,989 - SM_b20574 0.45 -0.2 1,587,989 - SM_b20574 0.45 +0.7 1,588,105 + SM_b20574 0.49 +0.0 1,588,106 - SM_b20574 0.49 -0.1 1,588,112 + SM_b20574 0.49 -0.8 1,588,113 - SM_b20574 0.49 +0.1 1,588,165 - SM_b20574 0.51 +0.3 1,588,165 - SM_b20574 0.51 +0.6 1,588,334 + SM_b20574 0.58 +0.0 1,588,468 + SM_b20574 0.63 -0.7 1,588,790 + SM_b20574 0.75 +0.6 1,588,791 - SM_b20574 0.75 -0.5 1,588,951 + SM_b20574 0.81 -2.1 1,588,955 + SM_b20574 0.81 +0.0 1,588,955 + SM_b20574 0.81 -1.2 1,588,955 + SM_b20574 0.81 +2.0 1,588,955 + SM_b20574 0.81 -0.4 1,589,097 + SM_b20574 0.87 -1.6 1,589,108 + SM_b20574 0.87 -0.6 1,589,348 + -0.1 1,589,409 + -1.1 1,589,410 - +0.1 1,589,410 - -2.2 1,590,177 - SM_b20575 0.68 +0.1
Or see this region's nucleotide sequence