Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20150 and SM_b20151 are separated by 65 nucleotides SM_b20151 and SM_b20152 overlap by 7 nucleotides SM_b20152 and SM_b20153 are separated by 83 nucleotides
SM_b20150: SM_b20150 - inositol monophosphatase, at 165,740 to 166,579
_b20150
SM_b20151: SM_b20151 - hypothetical protein, at 166,645 to 167,262
_b20151
SM_b20152: SM_b20152 - hypothetical protein, at 167,256 to 168,974
_b20152
SM_b20153: SM_b20153 - hypothetical protein, at 169,058 to 170,701
_b20153
Position (kb) 167
168
169 Strain fitness (log2 ratio) -2
-1
0
1
2 at 166.360 kb on + strand, within SM_b20150 at 166.528 kb on - strand at 166.817 kb on - strand, within SM_b20151 at 166.877 kb on + strand, within SM_b20151 at 166.878 kb on - strand, within SM_b20151 at 166.886 kb on - strand, within SM_b20151 at 166.886 kb on - strand, within SM_b20151 at 166.886 kb on - strand, within SM_b20151 at 166.942 kb on + strand, within SM_b20151 at 166.942 kb on + strand, within SM_b20151 at 166.942 kb on + strand, within SM_b20151 at 166.942 kb on + strand, within SM_b20151 at 166.943 kb on - strand, within SM_b20151 at 166.943 kb on - strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.946 kb on - strand, within SM_b20151 at 166.946 kb on - strand, within SM_b20151 at 166.950 kb on - strand, within SM_b20151 at 167.098 kb on + strand, within SM_b20151 at 167.098 kb on + strand, within SM_b20151 at 167.491 kb on - strand, within SM_b20152 at 167.575 kb on - strand, within SM_b20152 at 167.575 kb on - strand, within SM_b20152 at 167.718 kb on + strand, within SM_b20152 at 167.718 kb on + strand, within SM_b20152 at 167.719 kb on - strand, within SM_b20152 at 167.719 kb on - strand, within SM_b20152 at 167.785 kb on - strand, within SM_b20152 at 167.872 kb on - strand, within SM_b20152 at 167.893 kb on - strand, within SM_b20152 at 168.315 kb on - strand, within SM_b20152 at 168.442 kb on - strand, within SM_b20152 at 168.442 kb on - strand, within SM_b20152 at 168.501 kb on + strand, within SM_b20152 at 168.502 kb on - strand, within SM_b20152 at 168.738 kb on + strand, within SM_b20152 at 168.777 kb on - strand, within SM_b20152 at 168.801 kb on + strand, within SM_b20152 at 168.874 kb on + strand at 168.992 kb on + strand at 169.046 kb on + strand at 169.046 kb on + strand at 169.046 kb on + strand at 169.400 kb on - strand, within SM_b20153 at 169.838 kb on + strand, within SM_b20153 at 169.838 kb on + strand, within SM_b20153 at 169.839 kb on - strand, within SM_b20153 at 169.860 kb on + strand, within SM_b20153 at 169.860 kb on + strand, within SM_b20153 at 169.861 kb on - strand, within SM_b20153 at 169.861 kb on - strand, within SM_b20153 at 169.861 kb on - strand, within SM_b20153 at 169.861 kb on - strand, within SM_b20153
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 166,360 + SM_b20150 0.74 +0.8 166,528 - +0.8 166,817 - SM_b20151 0.28 -0.4 166,877 + SM_b20151 0.38 -0.1 166,878 - SM_b20151 0.38 -0.3 166,886 - SM_b20151 0.39 +0.8 166,886 - SM_b20151 0.39 -0.5 166,886 - SM_b20151 0.39 +0.5 166,942 + SM_b20151 0.48 +1.1 166,942 + SM_b20151 0.48 +0.7 166,942 + SM_b20151 0.48 +0.7 166,942 + SM_b20151 0.48 +0.1 166,943 - SM_b20151 0.48 -0.4 166,943 - SM_b20151 0.48 -0.5 166,945 + SM_b20151 0.49 -0.2 166,945 + SM_b20151 0.49 -1.7 166,945 + SM_b20151 0.49 +1.1 166,945 + SM_b20151 0.49 +2.1 166,945 + SM_b20151 0.49 +0.2 166,946 - SM_b20151 0.49 -0.4 166,946 - SM_b20151 0.49 -0.2 166,950 - SM_b20151 0.49 -0.2 167,098 + SM_b20151 0.73 -0.4 167,098 + SM_b20151 0.73 -0.4 167,491 - SM_b20152 0.14 -0.1 167,575 - SM_b20152 0.19 +0.3 167,575 - SM_b20152 0.19 -0.5 167,718 + SM_b20152 0.27 -1.5 167,718 + SM_b20152 0.27 -0.0 167,719 - SM_b20152 0.27 +0.8 167,719 - SM_b20152 0.27 -0.4 167,785 - SM_b20152 0.31 -0.9 167,872 - SM_b20152 0.36 -0.2 167,893 - SM_b20152 0.37 -0.8 168,315 - SM_b20152 0.62 -1.1 168,442 - SM_b20152 0.69 -0.4 168,442 - SM_b20152 0.69 -0.9 168,501 + SM_b20152 0.72 +0.1 168,502 - SM_b20152 0.72 +0.3 168,738 + SM_b20152 0.86 -2.0 168,777 - SM_b20152 0.88 +0.0 168,801 + SM_b20152 0.90 -0.2 168,874 + +0.4 168,992 + +0.1 169,046 + -0.7 169,046 + +0.2 169,046 + -1.7 169,400 - SM_b20153 0.21 -0.5 169,838 + SM_b20153 0.47 +0.4 169,838 + SM_b20153 0.47 +1.7 169,839 - SM_b20153 0.48 -0.2 169,860 + SM_b20153 0.49 +0.5 169,860 + SM_b20153 0.49 +0.1 169,861 - SM_b20153 0.49 +0.5 169,861 - SM_b20153 0.49 +0.0 169,861 - SM_b20153 0.49 -0.3 169,861 - SM_b20153 0.49 -1.9
Or see this region's nucleotide sequence