Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
RR42_RS04190: RR42_RS04190 - hypothetical protein, at 926,604 to 927,563
_RS04190
Position (kb) 926
927
928 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 925.621 kb on + strand at 925.621 kb on + strand at 925.622 kb on - strand at 925.622 kb on - strand at 925.622 kb on - strand at 925.669 kb on + strand at 925.669 kb on + strand at 925.669 kb on + strand at 925.670 kb on - strand at 925.670 kb on - strand at 925.670 kb on - strand at 925.734 kb on + strand at 925.734 kb on + strand at 925.734 kb on + strand at 925.734 kb on + strand at 925.734 kb on + strand at 925.734 kb on + strand at 925.734 kb on + strand at 925.735 kb on - strand at 925.735 kb on - strand at 925.829 kb on - strand at 925.855 kb on + strand at 925.856 kb on - strand at 925.856 kb on - strand at 926.001 kb on + strand at 926.001 kb on + strand at 926.001 kb on + strand at 926.001 kb on + strand at 926.002 kb on - strand at 926.193 kb on + strand at 926.193 kb on + strand at 926.194 kb on - strand at 926.240 kb on + strand at 926.255 kb on + strand at 926.275 kb on - strand at 926.275 kb on - strand at 926.277 kb on - strand at 926.326 kb on + strand at 926.327 kb on - strand at 926.327 kb on - strand at 926.327 kb on - strand at 926.327 kb on - strand at 926.348 kb on + strand at 926.348 kb on + strand at 926.348 kb on + strand at 926.349 kb on - strand at 926.349 kb on - strand at 926.349 kb on - strand at 926.349 kb on - strand at 926.352 kb on + strand at 926.352 kb on + strand at 926.352 kb on + strand at 926.352 kb on + strand at 926.352 kb on + strand at 926.352 kb on + strand at 926.353 kb on - strand at 926.353 kb on - strand at 926.353 kb on - strand at 926.353 kb on - strand at 926.463 kb on + strand at 926.463 kb on + strand at 926.464 kb on - strand at 926.478 kb on + strand at 926.479 kb on - strand at 926.479 kb on - strand at 926.497 kb on - strand at 926.523 kb on + strand at 926.528 kb on + strand at 926.529 kb on - strand at 926.542 kb on + strand at 926.542 kb on + strand at 926.832 kb on + strand, within RR42_RS04190 at 926.876 kb on - strand, within RR42_RS04190 at 926.888 kb on + strand, within RR42_RS04190 at 926.889 kb on - strand, within RR42_RS04190 at 926.908 kb on - strand, within RR42_RS04190 at 926.908 kb on - strand, within RR42_RS04190 at 926.908 kb on - strand, within RR42_RS04190 at 926.994 kb on + strand, within RR42_RS04190 at 926.995 kb on - strand, within RR42_RS04190 at 927.045 kb on + strand, within RR42_RS04190 at 927.195 kb on + strand, within RR42_RS04190 at 927.195 kb on + strand, within RR42_RS04190 at 927.195 kb on + strand, within RR42_RS04190 at 927.196 kb on - strand, within RR42_RS04190 at 927.196 kb on - strand, within RR42_RS04190 at 927.253 kb on + strand, within RR42_RS04190 at 927.253 kb on + strand, within RR42_RS04190 at 927.253 kb on + strand, within RR42_RS04190 at 927.253 kb on + strand, within RR42_RS04190 at 927.253 kb on + strand, within RR42_RS04190 at 927.253 kb on + strand, within RR42_RS04190 at 927.253 kb on + strand, within RR42_RS04190 at 927.253 kb on + strand, within RR42_RS04190 at 927.253 kb on + strand, within RR42_RS04190 at 927.254 kb on - strand, within RR42_RS04190 at 927.254 kb on - strand, within RR42_RS04190 at 927.256 kb on + strand, within RR42_RS04190 at 927.256 kb on + strand, within RR42_RS04190 at 927.256 kb on + strand, within RR42_RS04190 at 927.257 kb on - strand, within RR42_RS04190 at 927.257 kb on - strand, within RR42_RS04190 at 927.257 kb on - strand, within RR42_RS04190 at 927.257 kb on - strand, within RR42_RS04190 at 927.296 kb on - strand, within RR42_RS04190 at 927.296 kb on - strand, within RR42_RS04190 at 927.296 kb on - strand, within RR42_RS04190 at 927.321 kb on + strand, within RR42_RS04190 at 927.321 kb on + strand, within RR42_RS04190 at 927.441 kb on + strand, within RR42_RS04190 at 927.441 kb on + strand, within RR42_RS04190 at 927.441 kb on + strand, within RR42_RS04190 at 927.442 kb on - strand, within RR42_RS04190 at 927.442 kb on - strand, within RR42_RS04190 at 927.442 kb on - strand, within RR42_RS04190 at 927.502 kb on + strand at 927.502 kb on + strand at 927.502 kb on + strand at 927.502 kb on + strand at 927.502 kb on + strand at 927.583 kb on - strand at 927.651 kb on - strand at 927.680 kb on + strand at 927.793 kb on - strand at 927.854 kb on + strand at 927.854 kb on + strand at 927.854 kb on + strand at 927.854 kb on + strand at 927.855 kb on - strand at 927.855 kb on - strand at 927.855 kb on - strand at 927.934 kb on - strand at 927.975 kb on - strand at 928.128 kb on - strand at 928.128 kb on - strand at 928.130 kb on + strand at 928.130 kb on + strand at 928.130 kb on + strand at 928.131 kb on - strand at 928.131 kb on - strand at 928.131 kb on - strand at 928.131 kb on - strand at 928.131 kb on - strand at 928.131 kb on - strand at 928.131 kb on - strand at 928.131 kb on - strand at 928.157 kb on + strand at 928.158 kb on - strand at 928.171 kb on + strand at 928.172 kb on - strand at 928.225 kb on + strand at 928.225 kb on + strand at 928.225 kb on + strand at 928.255 kb on + strand at 928.255 kb on + strand at 928.256 kb on - strand at 928.256 kb on - strand at 928.256 kb on - strand at 928.293 kb on + strand at 928.294 kb on - strand at 928.334 kb on - strand at 928.341 kb on + strand at 928.342 kb on - strand at 928.432 kb on - strand at 928.457 kb on + strand at 928.457 kb on + strand at 928.457 kb on + strand at 928.457 kb on + strand at 928.457 kb on + strand at 928.458 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 925,621 + -1.7 925,621 + -0.3 925,622 - -0.3 925,622 - +0.2 925,622 - -0.8 925,669 + +1.3 925,669 + -0.7 925,669 + -0.8 925,670 - +0.0 925,670 - +1.3 925,670 - -1.3 925,734 + -0.7 925,734 + -1.1 925,734 + +1.9 925,734 + -0.5 925,734 + +0.1 925,734 + +0.2 925,734 + +0.3 925,735 - +0.1 925,735 - -2.0 925,829 - +1.1 925,855 + -0.6 925,856 - +0.3 925,856 - +0.6 926,001 + -0.1 926,001 + +0.4 926,001 + -0.2 926,001 + -0.8 926,002 - -1.2 926,193 + +0.2 926,193 + -0.1 926,194 - -0.6 926,240 + -0.3 926,255 + +0.2 926,275 - -0.3 926,275 - -1.5 926,277 - +0.0 926,326 + -0.8 926,327 - +0.6 926,327 - -0.5 926,327 - -1.1 926,327 - +0.7 926,348 + +0.0 926,348 + -0.6 926,348 + -1.8 926,349 - +0.5 926,349 - -1.0 926,349 - -1.5 926,349 - +0.2 926,352 + -0.4 926,352 + -0.4 926,352 + -0.3 926,352 + +1.2 926,352 + +0.0 926,352 + +0.2 926,353 - +0.4 926,353 - +1.0 926,353 - -0.8 926,353 - -0.3 926,463 + +0.7 926,463 + +0.4 926,464 - -0.4 926,478 + -0.6 926,479 - -0.3 926,479 - +2.2 926,497 - +0.1 926,523 + +1.1 926,528 + -0.1 926,529 - -0.3 926,542 + -0.3 926,542 + -0.4 926,832 + RR42_RS04190 0.24 -0.5 926,876 - RR42_RS04190 0.28 +0.7 926,888 + RR42_RS04190 0.30 -1.5 926,889 - RR42_RS04190 0.30 +0.4 926,908 - RR42_RS04190 0.32 +0.5 926,908 - RR42_RS04190 0.32 -1.0 926,908 - RR42_RS04190 0.32 -0.0 926,994 + RR42_RS04190 0.41 -1.6 926,995 - RR42_RS04190 0.41 -1.3 927,045 + RR42_RS04190 0.46 +0.9 927,195 + RR42_RS04190 0.62 +0.8 927,195 + RR42_RS04190 0.62 -0.1 927,195 + RR42_RS04190 0.62 -0.6 927,196 - RR42_RS04190 0.62 -0.2 927,196 - RR42_RS04190 0.62 -0.0 927,253 + RR42_RS04190 0.68 +0.0 927,253 + RR42_RS04190 0.68 -0.4 927,253 + RR42_RS04190 0.68 +0.5 927,253 + RR42_RS04190 0.68 +1.1 927,253 + RR42_RS04190 0.68 +1.6 927,253 + RR42_RS04190 0.68 +0.0 927,253 + RR42_RS04190 0.68 +0.3 927,253 + RR42_RS04190 0.68 +0.1 927,253 + RR42_RS04190 0.68 -1.0 927,254 - RR42_RS04190 0.68 -0.2 927,254 - RR42_RS04190 0.68 +0.7 927,256 + RR42_RS04190 0.68 +1.7 927,256 + RR42_RS04190 0.68 -0.0 927,256 + RR42_RS04190 0.68 -0.3 927,257 - RR42_RS04190 0.68 -0.0 927,257 - RR42_RS04190 0.68 -0.2 927,257 - RR42_RS04190 0.68 -0.2 927,257 - RR42_RS04190 0.68 -1.2 927,296 - RR42_RS04190 0.72 -1.6 927,296 - RR42_RS04190 0.72 +0.7 927,296 - RR42_RS04190 0.72 -2.3 927,321 + RR42_RS04190 0.75 +0.5 927,321 + RR42_RS04190 0.75 +0.4 927,441 + RR42_RS04190 0.87 -0.3 927,441 + RR42_RS04190 0.87 -0.6 927,441 + RR42_RS04190 0.87 +0.1 927,442 - RR42_RS04190 0.87 +0.2 927,442 - RR42_RS04190 0.87 +0.5 927,442 - RR42_RS04190 0.87 +0.7 927,502 + -0.9 927,502 + -3.2 927,502 + +0.3 927,502 + +0.6 927,502 + +0.1 927,583 - +0.8 927,651 - -0.2 927,680 + -1.2 927,793 - +0.4 927,854 + -0.3 927,854 + -0.1 927,854 + -0.9 927,854 + -0.6 927,855 - +0.7 927,855 - +0.1 927,855 - -3.2 927,934 - -0.5 927,975 - +0.5 928,128 - -0.7 928,128 - -0.7 928,130 + -0.8 928,130 + -0.3 928,130 + +0.4 928,131 - +0.8 928,131 - -0.5 928,131 - -0.8 928,131 - +0.1 928,131 - +0.1 928,131 - +0.1 928,131 - -1.7 928,131 - -1.3 928,157 + +1.4 928,158 - +0.1 928,171 + -0.3 928,172 - -0.3 928,225 + +0.4 928,225 + -1.3 928,225 + +0.0 928,255 + +0.4 928,255 + -2.7 928,256 - -0.3 928,256 - -1.3 928,256 - +0.6 928,293 + -0.6 928,294 - -0.4 928,334 - +0.1 928,341 + +0.4 928,342 - +0.6 928,432 - -0.6 928,457 + -0.1 928,457 + -0.2 928,457 + -0.7 928,457 + -0.8 928,457 + -0.4 928,458 - -0.0
Or see this region's nucleotide sequence