Experiment: Collected from freezer stock
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMJJ_RS00850 and MMJJ_RS00855 are separated by 46 nucleotides MMJJ_RS00855 and MMJJ_RS00860 are separated by 90 nucleotides
MMJJ_RS00850: MMJJ_RS00850 - formylmethanofuran dehydrogenase subunit B, at 161,068 to 162,372
_RS00850
MMJJ_RS00855: MMJJ_RS00855 - CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein, at 162,419 to 164,383
_RS00855
MMJJ_RS00860: MMJJ_RS00860 - 4Fe-4S binding protein, at 164,474 to 165,667
_RS00860
Position (kb) 162
163
164
165 Strain fitness (log2 ratio) -1
0
1
2
3 at 161.430 kb on + strand, within MMJJ_RS00850 at 161.485 kb on - strand, within MMJJ_RS00850 at 161.485 kb on - strand, within MMJJ_RS00850 at 161.486 kb on + strand, within MMJJ_RS00850 at 161.492 kb on - strand, within MMJJ_RS00850 at 161.492 kb on - strand, within MMJJ_RS00850 at 161.493 kb on + strand, within MMJJ_RS00850 at 161.575 kb on + strand, within MMJJ_RS00850 at 161.589 kb on - strand, within MMJJ_RS00850 at 161.657 kb on - strand, within MMJJ_RS00850 at 161.657 kb on - strand, within MMJJ_RS00850 at 161.657 kb on - strand, within MMJJ_RS00850 at 161.657 kb on - strand, within MMJJ_RS00850 at 161.658 kb on + strand, within MMJJ_RS00850 at 161.658 kb on + strand, within MMJJ_RS00850 at 161.658 kb on + strand, within MMJJ_RS00850 at 161.660 kb on + strand, within MMJJ_RS00850 at 161.687 kb on + strand, within MMJJ_RS00850 at 161.734 kb on - strand, within MMJJ_RS00850 at 161.734 kb on - strand, within MMJJ_RS00850 at 161.734 kb on - strand, within MMJJ_RS00850 at 161.735 kb on + strand, within MMJJ_RS00850 at 161.735 kb on + strand, within MMJJ_RS00850 at 161.736 kb on - strand, within MMJJ_RS00850 at 161.736 kb on - strand, within MMJJ_RS00850 at 161.736 kb on - strand, within MMJJ_RS00850 at 161.736 kb on - strand, within MMJJ_RS00850 at 161.744 kb on - strand, within MMJJ_RS00850 at 161.745 kb on + strand, within MMJJ_RS00850 at 161.752 kb on + strand, within MMJJ_RS00850 at 161.783 kb on + strand, within MMJJ_RS00850 at 161.815 kb on - strand, within MMJJ_RS00850 at 161.815 kb on - strand, within MMJJ_RS00850 at 161.816 kb on + strand, within MMJJ_RS00850 at 161.821 kb on - strand, within MMJJ_RS00850 at 161.821 kb on - strand, within MMJJ_RS00850 at 161.925 kb on + strand, within MMJJ_RS00850 at 161.929 kb on - strand, within MMJJ_RS00850 at 161.964 kb on - strand, within MMJJ_RS00850 at 161.964 kb on - strand, within MMJJ_RS00850 at 161.964 kb on - strand, within MMJJ_RS00850 at 161.965 kb on + strand, within MMJJ_RS00850 at 161.969 kb on + strand, within MMJJ_RS00850 at 161.969 kb on + strand, within MMJJ_RS00850 at 161.969 kb on + strand, within MMJJ_RS00850 at 161.969 kb on + strand, within MMJJ_RS00850 at 161.998 kb on - strand, within MMJJ_RS00850 at 161.998 kb on - strand, within MMJJ_RS00850 at 162.016 kb on - strand, within MMJJ_RS00850 at 162.016 kb on - strand, within MMJJ_RS00850 at 162.034 kb on - strand, within MMJJ_RS00850 at 162.034 kb on - strand, within MMJJ_RS00850 at 162.034 kb on - strand, within MMJJ_RS00850 at 162.034 kb on - strand, within MMJJ_RS00850 at 162.034 kb on - strand, within MMJJ_RS00850 at 162.035 kb on + strand, within MMJJ_RS00850 at 162.066 kb on - strand, within MMJJ_RS00850 at 162.076 kb on + strand, within MMJJ_RS00850 at 162.111 kb on - strand, within MMJJ_RS00850 at 162.111 kb on - strand, within MMJJ_RS00850 at 162.226 kb on - strand, within MMJJ_RS00850 at 162.286 kb on - strand at 162.287 kb on + strand at 162.292 kb on + strand at 162.292 kb on + strand at 162.350 kb on + strand at 162.350 kb on + strand at 162.352 kb on - strand at 162.364 kb on + strand at 162.373 kb on - strand at 162.374 kb on + strand at 162.459 kb on + strand at 162.532 kb on - strand at 162.533 kb on + strand at 162.533 kb on + strand at 162.533 kb on + strand at 162.558 kb on + strand at 162.611 kb on - strand at 162.620 kb on + strand, within MMJJ_RS00855 at 162.654 kb on + strand, within MMJJ_RS00855 at 162.661 kb on - strand, within MMJJ_RS00855 at 162.662 kb on + strand, within MMJJ_RS00855 at 162.696 kb on + strand, within MMJJ_RS00855 at 162.696 kb on + strand, within MMJJ_RS00855 at 162.745 kb on - strand, within MMJJ_RS00855 at 162.777 kb on - strand, within MMJJ_RS00855 at 162.777 kb on - strand, within MMJJ_RS00855 at 162.777 kb on - strand, within MMJJ_RS00855 at 162.777 kb on - strand, within MMJJ_RS00855 at 162.778 kb on + strand, within MMJJ_RS00855 at 162.778 kb on + strand, within MMJJ_RS00855 at 162.778 kb on + strand, within MMJJ_RS00855 at 162.810 kb on + strand, within MMJJ_RS00855 at 162.814 kb on - strand, within MMJJ_RS00855 at 162.901 kb on - strand, within MMJJ_RS00855 at 162.901 kb on - strand, within MMJJ_RS00855 at 162.901 kb on - strand, within MMJJ_RS00855 at 162.901 kb on - strand, within MMJJ_RS00855 at 162.906 kb on + strand, within MMJJ_RS00855 at 162.920 kb on - strand, within MMJJ_RS00855 at 162.921 kb on + strand, within MMJJ_RS00855 at 162.921 kb on + strand, within MMJJ_RS00855 at 162.921 kb on + strand, within MMJJ_RS00855 at 162.974 kb on - strand, within MMJJ_RS00855 at 162.997 kb on - strand, within MMJJ_RS00855 at 163.005 kb on + strand, within MMJJ_RS00855 at 163.005 kb on + strand, within MMJJ_RS00855 at 163.104 kb on - strand, within MMJJ_RS00855 at 163.105 kb on + strand, within MMJJ_RS00855 at 163.107 kb on - strand, within MMJJ_RS00855 at 163.108 kb on + strand, within MMJJ_RS00855 at 163.108 kb on + strand, within MMJJ_RS00855 at 163.167 kb on - strand, within MMJJ_RS00855 at 163.167 kb on - strand, within MMJJ_RS00855 at 163.168 kb on + strand, within MMJJ_RS00855 at 163.168 kb on + strand, within MMJJ_RS00855 at 163.171 kb on - strand, within MMJJ_RS00855 at 163.171 kb on - strand, within MMJJ_RS00855 at 163.171 kb on - strand, within MMJJ_RS00855 at 163.172 kb on + strand, within MMJJ_RS00855 at 163.172 kb on + strand, within MMJJ_RS00855 at 163.178 kb on - strand, within MMJJ_RS00855 at 163.179 kb on + strand, within MMJJ_RS00855 at 163.395 kb on - strand, within MMJJ_RS00855 at 163.396 kb on + strand, within MMJJ_RS00855 at 163.401 kb on + strand, within MMJJ_RS00855 at 163.418 kb on + strand, within MMJJ_RS00855 at 163.455 kb on - strand, within MMJJ_RS00855 at 163.561 kb on + strand, within MMJJ_RS00855 at 163.610 kb on - strand, within MMJJ_RS00855 at 163.611 kb on + strand, within MMJJ_RS00855 at 163.612 kb on - strand, within MMJJ_RS00855 at 163.612 kb on - strand, within MMJJ_RS00855 at 163.613 kb on + strand, within MMJJ_RS00855 at 163.613 kb on + strand, within MMJJ_RS00855 at 163.613 kb on + strand, within MMJJ_RS00855 at 163.613 kb on + strand, within MMJJ_RS00855 at 163.619 kb on - strand, within MMJJ_RS00855 at 163.619 kb on - strand, within MMJJ_RS00855 at 163.619 kb on - strand, within MMJJ_RS00855 at 163.619 kb on - strand, within MMJJ_RS00855 at 163.620 kb on + strand, within MMJJ_RS00855 at 163.620 kb on + strand, within MMJJ_RS00855 at 163.665 kb on - strand, within MMJJ_RS00855 at 163.666 kb on + strand, within MMJJ_RS00855 at 163.708 kb on + strand, within MMJJ_RS00855 at 163.716 kb on + strand, within MMJJ_RS00855 at 163.750 kb on - strand, within MMJJ_RS00855 at 163.751 kb on + strand, within MMJJ_RS00855 at 163.829 kb on - strand, within MMJJ_RS00855 at 163.830 kb on + strand, within MMJJ_RS00855 at 163.974 kb on - strand, within MMJJ_RS00855 at 163.975 kb on + strand, within MMJJ_RS00855 at 164.132 kb on - strand, within MMJJ_RS00855 at 164.133 kb on + strand, within MMJJ_RS00855 at 164.133 kb on + strand, within MMJJ_RS00855 at 164.144 kb on + strand, within MMJJ_RS00855 at 164.150 kb on + strand, within MMJJ_RS00855 at 164.187 kb on + strand at 164.306 kb on - strand at 164.465 kb on - strand at 164.465 kb on - strand at 164.465 kb on - strand at 164.466 kb on + strand at 164.486 kb on - strand at 164.487 kb on + strand at 164.501 kb on + strand at 164.501 kb on + strand at 164.522 kb on + strand at 164.538 kb on + strand at 164.577 kb on + strand at 164.609 kb on + strand, within MMJJ_RS00860 at 164.738 kb on + strand, within MMJJ_RS00860 at 164.835 kb on + strand, within MMJJ_RS00860 at 164.853 kb on - strand, within MMJJ_RS00860 at 164.960 kb on - strand, within MMJJ_RS00860 at 164.960 kb on - strand, within MMJJ_RS00860 at 164.961 kb on + strand, within MMJJ_RS00860 at 165.008 kb on - strand, within MMJJ_RS00860 at 165.018 kb on + strand, within MMJJ_RS00860 at 165.062 kb on - strand, within MMJJ_RS00860 at 165.062 kb on - strand, within MMJJ_RS00860 at 165.063 kb on + strand, within MMJJ_RS00860 at 165.063 kb on + strand, within MMJJ_RS00860 at 165.092 kb on + strand, within MMJJ_RS00860 at 165.166 kb on - strand, within MMJJ_RS00860 at 165.171 kb on - strand, within MMJJ_RS00860 at 165.172 kb on + strand, within MMJJ_RS00860 at 165.172 kb on + strand, within MMJJ_RS00860 at 165.174 kb on + strand, within MMJJ_RS00860 at 165.174 kb on + strand, within MMJJ_RS00860 at 165.176 kb on + strand, within MMJJ_RS00860 at 165.244 kb on - strand, within MMJJ_RS00860 at 165.244 kb on - strand, within MMJJ_RS00860 at 165.245 kb on + strand, within MMJJ_RS00860 at 165.245 kb on + strand, within MMJJ_RS00860 at 165.248 kb on - strand, within MMJJ_RS00860 at 165.301 kb on - strand, within MMJJ_RS00860 at 165.326 kb on - strand, within MMJJ_RS00860 at 165.326 kb on - strand, within MMJJ_RS00860 at 165.345 kb on - strand, within MMJJ_RS00860
Per-strain Table
Position Strand Gene LocusTag Fraction Collected from freezer stock remove 161,430 + MMJJ_RS00850 0.28 -0.3 161,485 - MMJJ_RS00850 0.32 +0.2 161,485 - MMJJ_RS00850 0.32 -0.2 161,486 + MMJJ_RS00850 0.32 -0.4 161,492 - MMJJ_RS00850 0.32 -0.1 161,492 - MMJJ_RS00850 0.32 +0.9 161,493 + MMJJ_RS00850 0.33 -0.7 161,575 + MMJJ_RS00850 0.39 -0.4 161,589 - MMJJ_RS00850 0.40 -0.1 161,657 - MMJJ_RS00850 0.45 +0.3 161,657 - MMJJ_RS00850 0.45 -0.6 161,657 - MMJJ_RS00850 0.45 +0.8 161,657 - MMJJ_RS00850 0.45 +0.7 161,658 + MMJJ_RS00850 0.45 -1.5 161,658 + MMJJ_RS00850 0.45 +0.0 161,658 + MMJJ_RS00850 0.45 -0.1 161,660 + MMJJ_RS00850 0.45 -0.2 161,687 + MMJJ_RS00850 0.47 -0.5 161,734 - MMJJ_RS00850 0.51 +0.1 161,734 - MMJJ_RS00850 0.51 -0.6 161,734 - MMJJ_RS00850 0.51 +3.4 161,735 + MMJJ_RS00850 0.51 +1.1 161,735 + MMJJ_RS00850 0.51 -0.2 161,736 - MMJJ_RS00850 0.51 +0.4 161,736 - MMJJ_RS00850 0.51 -0.9 161,736 - MMJJ_RS00850 0.51 +0.1 161,736 - MMJJ_RS00850 0.51 +0.2 161,744 - MMJJ_RS00850 0.52 +0.8 161,745 + MMJJ_RS00850 0.52 -0.4 161,752 + MMJJ_RS00850 0.52 +0.7 161,783 + MMJJ_RS00850 0.55 +0.2 161,815 - MMJJ_RS00850 0.57 +0.2 161,815 - MMJJ_RS00850 0.57 +0.0 161,816 + MMJJ_RS00850 0.57 +0.2 161,821 - MMJJ_RS00850 0.58 +0.4 161,821 - MMJJ_RS00850 0.58 -0.2 161,925 + MMJJ_RS00850 0.66 -0.4 161,929 - MMJJ_RS00850 0.66 -0.1 161,964 - MMJJ_RS00850 0.69 -0.2 161,964 - MMJJ_RS00850 0.69 -0.3 161,964 - MMJJ_RS00850 0.69 -0.4 161,965 + MMJJ_RS00850 0.69 +0.5 161,969 + MMJJ_RS00850 0.69 +0.0 161,969 + MMJJ_RS00850 0.69 +0.3 161,969 + MMJJ_RS00850 0.69 -0.2 161,969 + MMJJ_RS00850 0.69 +0.3 161,998 - MMJJ_RS00850 0.71 +0.3 161,998 - MMJJ_RS00850 0.71 -0.3 162,016 - MMJJ_RS00850 0.73 -0.5 162,016 - MMJJ_RS00850 0.73 -0.3 162,034 - MMJJ_RS00850 0.74 -0.3 162,034 - MMJJ_RS00850 0.74 -1.7 162,034 - MMJJ_RS00850 0.74 +0.2 162,034 - MMJJ_RS00850 0.74 +0.1 162,034 - MMJJ_RS00850 0.74 -0.5 162,035 + MMJJ_RS00850 0.74 -0.2 162,066 - MMJJ_RS00850 0.76 +0.3 162,076 + MMJJ_RS00850 0.77 -0.1 162,111 - MMJJ_RS00850 0.80 +0.5 162,111 - MMJJ_RS00850 0.80 +0.1 162,226 - MMJJ_RS00850 0.89 -0.6 162,286 - +1.3 162,287 + +0.1 162,292 + -0.5 162,292 + -0.1 162,350 + +0.3 162,350 + +0.7 162,352 - -0.2 162,364 + +0.4 162,373 - -0.4 162,374 + +0.1 162,459 + +0.1 162,532 - +0.5 162,533 + +0.5 162,533 + +1.0 162,533 + -0.2 162,558 + -0.2 162,611 - +0.6 162,620 + MMJJ_RS00855 0.10 -0.2 162,654 + MMJJ_RS00855 0.12 +0.8 162,661 - MMJJ_RS00855 0.12 -0.0 162,662 + MMJJ_RS00855 0.12 -0.5 162,696 + MMJJ_RS00855 0.14 -0.1 162,696 + MMJJ_RS00855 0.14 +0.2 162,745 - MMJJ_RS00855 0.17 -0.3 162,777 - MMJJ_RS00855 0.18 -0.4 162,777 - MMJJ_RS00855 0.18 -0.0 162,777 - MMJJ_RS00855 0.18 -0.8 162,777 - MMJJ_RS00855 0.18 +0.0 162,778 + MMJJ_RS00855 0.18 -0.1 162,778 + MMJJ_RS00855 0.18 -0.2 162,778 + MMJJ_RS00855 0.18 -0.1 162,810 + MMJJ_RS00855 0.20 -1.1 162,814 - MMJJ_RS00855 0.20 +0.4 162,901 - MMJJ_RS00855 0.25 -0.4 162,901 - MMJJ_RS00855 0.25 +1.2 162,901 - MMJJ_RS00855 0.25 +0.2 162,901 - MMJJ_RS00855 0.25 -0.3 162,906 + MMJJ_RS00855 0.25 +0.9 162,920 - MMJJ_RS00855 0.25 +0.0 162,921 + MMJJ_RS00855 0.26 -0.1 162,921 + MMJJ_RS00855 0.26 -1.0 162,921 + MMJJ_RS00855 0.26 -0.1 162,974 - MMJJ_RS00855 0.28 +0.1 162,997 - MMJJ_RS00855 0.29 -0.3 163,005 + MMJJ_RS00855 0.30 +0.3 163,005 + MMJJ_RS00855 0.30 +1.2 163,104 - MMJJ_RS00855 0.35 -0.8 163,105 + MMJJ_RS00855 0.35 +0.2 163,107 - MMJJ_RS00855 0.35 +0.0 163,108 + MMJJ_RS00855 0.35 +2.8 163,108 + MMJJ_RS00855 0.35 +1.4 163,167 - MMJJ_RS00855 0.38 +1.3 163,167 - MMJJ_RS00855 0.38 +0.3 163,168 + MMJJ_RS00855 0.38 -0.5 163,168 + MMJJ_RS00855 0.38 -0.2 163,171 - MMJJ_RS00855 0.38 -0.4 163,171 - MMJJ_RS00855 0.38 -0.1 163,171 - MMJJ_RS00855 0.38 -1.1 163,172 + MMJJ_RS00855 0.38 +0.6 163,172 + MMJJ_RS00855 0.38 -0.3 163,178 - MMJJ_RS00855 0.39 +0.3 163,179 + MMJJ_RS00855 0.39 -0.2 163,395 - MMJJ_RS00855 0.50 -0.5 163,396 + MMJJ_RS00855 0.50 -0.4 163,401 + MMJJ_RS00855 0.50 -0.1 163,418 + MMJJ_RS00855 0.51 -0.2 163,455 - MMJJ_RS00855 0.53 -0.2 163,561 + MMJJ_RS00855 0.58 -0.2 163,610 - MMJJ_RS00855 0.61 -0.0 163,611 + MMJJ_RS00855 0.61 +0.0 163,612 - MMJJ_RS00855 0.61 -0.3 163,612 - MMJJ_RS00855 0.61 -0.1 163,613 + MMJJ_RS00855 0.61 -0.3 163,613 + MMJJ_RS00855 0.61 -0.5 163,613 + MMJJ_RS00855 0.61 -0.8 163,613 + MMJJ_RS00855 0.61 -0.3 163,619 - MMJJ_RS00855 0.61 -0.1 163,619 - MMJJ_RS00855 0.61 -0.3 163,619 - MMJJ_RS00855 0.61 -0.4 163,619 - MMJJ_RS00855 0.61 +0.5 163,620 + MMJJ_RS00855 0.61 +0.4 163,620 + MMJJ_RS00855 0.61 -0.9 163,665 - MMJJ_RS00855 0.63 -0.2 163,666 + MMJJ_RS00855 0.63 +0.1 163,708 + MMJJ_RS00855 0.66 -0.4 163,716 + MMJJ_RS00855 0.66 -0.1 163,750 - MMJJ_RS00855 0.68 -0.2 163,751 + MMJJ_RS00855 0.68 +0.2 163,829 - MMJJ_RS00855 0.72 -0.3 163,830 + MMJJ_RS00855 0.72 -0.2 163,974 - MMJJ_RS00855 0.79 -0.2 163,975 + MMJJ_RS00855 0.79 +0.2 164,132 - MMJJ_RS00855 0.87 -0.4 164,133 + MMJJ_RS00855 0.87 +0.2 164,133 + MMJJ_RS00855 0.87 +0.5 164,144 + MMJJ_RS00855 0.88 +0.1 164,150 + MMJJ_RS00855 0.88 -0.0 164,187 + +0.2 164,306 - -0.3 164,465 - -0.7 164,465 - +0.1 164,465 - +0.0 164,466 + +0.1 164,486 - +0.3 164,487 + -0.0 164,501 + +0.2 164,501 + +0.2 164,522 + +0.9 164,538 + -0.3 164,577 + -1.0 164,609 + MMJJ_RS00860 0.11 -0.2 164,738 + MMJJ_RS00860 0.22 +0.3 164,835 + MMJJ_RS00860 0.30 -0.6 164,853 - MMJJ_RS00860 0.32 -0.3 164,960 - MMJJ_RS00860 0.41 -0.3 164,960 - MMJJ_RS00860 0.41 -1.2 164,961 + MMJJ_RS00860 0.41 -0.3 165,008 - MMJJ_RS00860 0.45 +0.2 165,018 + MMJJ_RS00860 0.46 -0.2 165,062 - MMJJ_RS00860 0.49 +0.6 165,062 - MMJJ_RS00860 0.49 +2.1 165,063 + MMJJ_RS00860 0.49 +0.3 165,063 + MMJJ_RS00860 0.49 +0.4 165,092 + MMJJ_RS00860 0.52 -0.2 165,166 - MMJJ_RS00860 0.58 -0.5 165,171 - MMJJ_RS00860 0.58 -0.1 165,172 + MMJJ_RS00860 0.58 +0.2 165,172 + MMJJ_RS00860 0.58 -0.0 165,174 + MMJJ_RS00860 0.59 -0.2 165,174 + MMJJ_RS00860 0.59 -0.1 165,176 + MMJJ_RS00860 0.59 -0.8 165,244 - MMJJ_RS00860 0.64 +0.1 165,244 - MMJJ_RS00860 0.64 -0.5 165,245 + MMJJ_RS00860 0.65 +0.1 165,245 + MMJJ_RS00860 0.65 +0.1 165,248 - MMJJ_RS00860 0.65 +0.2 165,301 - MMJJ_RS00860 0.69 -0.4 165,326 - MMJJ_RS00860 0.71 -0.0 165,326 - MMJJ_RS00860 0.71 -0.6 165,345 - MMJJ_RS00860 0.73 -0.6
Or see this region's nucleotide sequence