Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS27155
Experiment: Dimethyl Sulfoxide 6 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dimethyl Sulfoxide 6 vol% |
---|---|---|---|---|---|
remove | |||||
1,669,882 | + | BPHYT_RS27150 | 0.33 | -0.1 | |
1,669,883 | - | BPHYT_RS27150 | 0.33 | -0.1 | |
1,669,883 | - | BPHYT_RS27150 | 0.33 | +0.1 | |
1,669,984 | + | BPHYT_RS27150 | 0.42 | +0.3 | |
1,670,116 | + | BPHYT_RS27150 | 0.54 | -0.1 | |
1,670,132 | - | BPHYT_RS27150 | 0.56 | -1.2 | |
1,670,206 | + | -0.1 | |||
1,670,634 | - | +0.3 | |||
1,671,149 | - | BPHYT_RS27155 | 0.78 | -0.7 | |
1,671,751 | + | BPHYT_RS27160 | 0.51 | -0.2 | |
1,671,969 | - | -0.7 | |||
1,672,102 | + | -0.8 | |||
1,672,131 | + | -0.3 | |||
1,672,131 | + | +0.3 | |||
1,672,161 | + | -0.0 | |||
1,672,161 | + | -1.8 | |||
1,672,191 | - | -0.1 | |||
1,672,239 | + | BPHYT_RS27165 | 0.14 | -0.6 | |
1,672,239 | + | BPHYT_RS27165 | 0.14 | -0.7 |
Or see this region's nucleotide sequence