Experiment: Dimethyl Sulfoxide 6 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS23465 and BPHYT_RS23470 are separated by 89 nucleotides BPHYT_RS23470 and BPHYT_RS23475 are separated by 72 nucleotides BPHYT_RS23475 and BPHYT_RS23480 are separated by 339 nucleotides BPHYT_RS23480 and BPHYT_RS23485 are separated by 27 nucleotides
BPHYT_RS23465: BPHYT_RS23465 - aliphatic nitrilase, at 832,323 to 833,309
_RS23465
BPHYT_RS23470: BPHYT_RS23470 - carbonic anhydrase, at 833,399 to 833,953
_RS23470
BPHYT_RS23475: BPHYT_RS23475 - luciferase, at 834,026 to 835,033
_RS23475
BPHYT_RS23480: BPHYT_RS23480 - hypothetical protein, at 835,373 to 835,894
_RS23480
BPHYT_RS23485: BPHYT_RS23485 - glyoxalase, at 835,922 to 836,344
_RS23485
Position (kb) 834
835
836 Strain fitness (log2 ratio) -2
-1
0
1 at 833.085 kb on + strand, within BPHYT_RS23465 at 833.085 kb on + strand, within BPHYT_RS23465 at 833.447 kb on - strand at 833.488 kb on + strand, within BPHYT_RS23470 at 833.714 kb on - strand, within BPHYT_RS23470 at 834.084 kb on + strand at 834.177 kb on - strand, within BPHYT_RS23475 at 834.202 kb on + strand, within BPHYT_RS23475 at 835.028 kb on - strand at 835.172 kb on - strand at 835.280 kb on + strand at 835.326 kb on + strand at 835.327 kb on - strand at 835.535 kb on + strand, within BPHYT_RS23480 at 835.536 kb on - strand, within BPHYT_RS23480 at 835.917 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 6 vol% remove 833,085 + BPHYT_RS23465 0.77 +0.3 833,085 + BPHYT_RS23465 0.77 -0.3 833,447 - +0.1 833,488 + BPHYT_RS23470 0.16 -1.0 833,714 - BPHYT_RS23470 0.57 -1.2 834,084 + +0.9 834,177 - BPHYT_RS23475 0.15 -2.7 834,202 + BPHYT_RS23475 0.17 -0.3 835,028 - +0.2 835,172 - +0.7 835,280 + -0.1 835,326 + -0.1 835,327 - -0.0 835,535 + BPHYT_RS23480 0.31 -0.1 835,536 - BPHYT_RS23480 0.31 +0.2 835,917 - +0.2
Or see this region's nucleotide sequence