Experiment: Dimethyl Sulfoxide 6 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS21690 and BPHYT_RS21695 are separated by 21 nucleotides BPHYT_RS21695 and BPHYT_RS21700 overlap by 4 nucleotides BPHYT_RS21700 and BPHYT_RS21705 are separated by 148 nucleotides
BPHYT_RS21690: BPHYT_RS21690 - cobalt chelatase, at 420,858 to 422,591
_RS21690
BPHYT_RS21695: BPHYT_RS21695 - membrane protein, at 422,613 to 423,374
_RS21695
BPHYT_RS21700: BPHYT_RS21700 - phosphotransacetylase, at 423,371 to 424,405
_RS21700
BPHYT_RS21705: BPHYT_RS21705 - sulfoacetaldehyde acetyltransferase, at 424,554 to 426,386
_RS21705
Position (kb) 423
424
425 Strain fitness (log2 ratio) -1
0
1 at 422.400 kb on + strand, within BPHYT_RS21690 at 422.400 kb on + strand, within BPHYT_RS21690 at 422.403 kb on + strand at 422.403 kb on + strand, within BPHYT_RS21690 at 422.404 kb on - strand, within BPHYT_RS21690 at 422.499 kb on + strand at 422.500 kb on - strand at 422.896 kb on + strand, within BPHYT_RS21695 at 422.896 kb on + strand, within BPHYT_RS21695 at 423.037 kb on + strand, within BPHYT_RS21695 at 423.376 kb on + strand at 423.376 kb on + strand at 423.376 kb on + strand at 423.450 kb on + strand at 424.189 kb on + strand, within BPHYT_RS21700 at 424.190 kb on - strand, within BPHYT_RS21700 at 424.406 kb on - strand at 424.561 kb on + strand at 424.562 kb on - strand at 424.570 kb on + strand at 424.813 kb on + strand, within BPHYT_RS21705 at 424.945 kb on + strand, within BPHYT_RS21705 at 424.946 kb on - strand, within BPHYT_RS21705 at 425.065 kb on + strand, within BPHYT_RS21705 at 425.167 kb on + strand, within BPHYT_RS21705
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 6 vol% remove 422,400 + BPHYT_RS21690 0.89 -0.4 422,400 + BPHYT_RS21690 0.89 -0.7 422,403 + -0.4 422,403 + BPHYT_RS21690 0.89 +0.8 422,404 - BPHYT_RS21690 0.89 +0.3 422,499 + +0.6 422,500 - -0.1 422,896 + BPHYT_RS21695 0.37 +0.0 422,896 + BPHYT_RS21695 0.37 -0.1 423,037 + BPHYT_RS21695 0.56 +0.8 423,376 + -0.3 423,376 + -0.2 423,376 + -0.1 423,450 + -0.2 424,189 + BPHYT_RS21700 0.79 -0.8 424,190 - BPHYT_RS21700 0.79 -0.8 424,406 - +0.1 424,561 + +0.4 424,562 - +1.2 424,570 + -0.3 424,813 + BPHYT_RS21705 0.14 +0.5 424,945 + BPHYT_RS21705 0.21 +0.9 424,946 - BPHYT_RS21705 0.21 +1.2 425,065 + BPHYT_RS21705 0.28 -0.7 425,167 + BPHYT_RS21705 0.33 -0.3
Or see this region's nucleotide sequence