Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12495

Experiment: Dimethyl Sulfoxide 6 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 6 vol%
2,849,048	+		BPHYT_RS12490	0.73	-0.2
2,849,048	+		BPHYT_RS12490	0.73	-0.5
2,849,070	+		BPHYT_RS12490	0.75	+0.1
2,849,070	+		BPHYT_RS12490	0.75	+0.3
2,849,070	+		BPHYT_RS12490	0.75	-0.7
2,849,070	+		BPHYT_RS12490	0.75	-1.3
2,849,183	+		BPHYT_RS12490	0.84	+0.0
2,849,193	+		BPHYT_RS12490	0.84	+0.7
2,849,215	+		BPHYT_RS12490	0.86	+0.1
2,849,385	+				+0.1
2,849,402	+				+0.2
2,849,402	+				-0.1
2,849,409	+				-0.3
2,849,409	+				+0.7
2,850,007	-				+0.0
2,850,147	+				-0.6
2,850,447	-		BPHYT_RS12495	0.18	-0.4
2,850,686	+		BPHYT_RS12495	0.28	-0.5
2,850,687	-		BPHYT_RS12495	0.29	+0.2
2,850,767	+		BPHYT_RS12495	0.32	+0.0
2,850,767	+		BPHYT_RS12495	0.32	+0.1
2,850,808	-		BPHYT_RS12495	0.34	+0.4
2,850,892	-		BPHYT_RS12495	0.38	+0.3
2,850,892	-		BPHYT_RS12495	0.38	+0.7
2,851,350	+		BPHYT_RS12495	0.58	-0.9
2,851,350	+		BPHYT_RS12495	0.58	-3.1
2,851,350	+		BPHYT_RS12495	0.58	-0.7
2,851,526	+		BPHYT_RS12495	0.66	-0.1
2,851,527	-		BPHYT_RS12495	0.66	-0.2
2,851,721	+		BPHYT_RS12495	0.74	-0.0
2,851,721	+		BPHYT_RS12495	0.74	-0.2
2,851,724	+		BPHYT_RS12495	0.74	+0.2
2,851,724	+		BPHYT_RS12495	0.74	-0.1
2,851,725	-		BPHYT_RS12495	0.74	-0.6
2,851,736	+		BPHYT_RS12495	0.75	+0.2
2,851,736	+		BPHYT_RS12495	0.75	+0.1
2,851,759	-		BPHYT_RS12495	0.76	-0.2
2,851,890	-		BPHYT_RS12495	0.82	+0.0
2,851,895	+		BPHYT_RS12495	0.82	+0.6
2,851,895	+		BPHYT_RS12495	0.82	-0.6
2,851,895	+		BPHYT_RS12495	0.82	-0.3
2,851,896	-		BPHYT_RS12495	0.82	-0.4
2,851,896	-		BPHYT_RS12495	0.82	-3.0
2,851,896	-		BPHYT_RS12495	0.82	+0.5
2,852,518	+		BPHYT_RS12500	0.67	+0.0
2,852,518	+		BPHYT_RS12500	0.67	+0.4
2,852,518	+		BPHYT_RS12500	0.67	+1.5
2,852,519	-		BPHYT_RS12500	0.67	-1.0
2,852,719	+				+0.9
2,852,719	+				-1.1
2,852,719	+				+0.9