Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06175
Experiment: Dimethyl Sulfoxide 6 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dimethyl Sulfoxide 6 vol% |
---|---|---|---|---|---|
remove | |||||
1,408,578 | - | -0.4 | |||
1,408,620 | + | -0.2 | |||
1,408,668 | + | -1.5 | |||
1,408,668 | + | -2.5 | |||
1,408,740 | + | BPHYT_RS06175 | 0.16 | -1.6 | |
1,408,741 | - | BPHYT_RS06175 | 0.16 | -1.1 | |
1,408,836 | + | BPHYT_RS06175 | 0.28 | -1.3 | |
1,408,881 | + | BPHYT_RS06175 | 0.34 | +0.1 | |
1,408,882 | - | BPHYT_RS06175 | 0.35 | -1.4 | |
1,409,380 | + | -1.7 | |||
1,409,380 | + | -0.7 | |||
1,409,380 | + | -1.2 | |||
1,409,381 | - | -1.5 | |||
1,409,381 | - | +0.2 | |||
1,409,388 | + | -1.7 | |||
1,409,389 | - | +0.2 | |||
1,409,394 | - | -0.7 | |||
1,409,458 | - | +0.9 | |||
1,409,473 | - | -0.5 |
Or see this region's nucleotide sequence