Experiment: Dimethyl Sulfoxide 6 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS02685 and BPHYT_RS02690 are separated by 6 nucleotides BPHYT_RS02690 and BPHYT_RS02695 are separated by 4 nucleotides BPHYT_RS02695 and BPHYT_RS02700 are separated by 67 nucleotides
BPHYT_RS02685: BPHYT_RS02685 - cytochrome C oxidase subunit I, at 603,128 to 604,237
_RS02685
BPHYT_RS02690: BPHYT_RS02690 - protoheme IX farnesyltransferase, at 604,244 to 605,149
_RS02690
BPHYT_RS02695: BPHYT_RS02695 - photosynthetic protein synthase I, at 605,154 to 605,771
_RS02695
BPHYT_RS02700: BPHYT_RS02700 - hypothetical protein, at 605,839 to 606,129
_RS02700
Position (kb) 604
605
606 Strain fitness (log2 ratio) -2
-1
0
1 at 603.438 kb on - strand, within BPHYT_RS02685 at 603.499 kb on + strand, within BPHYT_RS02685 at 603.499 kb on + strand, within BPHYT_RS02685 at 603.499 kb on + strand, within BPHYT_RS02685 at 603.522 kb on + strand, within BPHYT_RS02685 at 603.522 kb on + strand, within BPHYT_RS02685 at 603.523 kb on - strand, within BPHYT_RS02685 at 603.523 kb on - strand, within BPHYT_RS02685 at 603.614 kb on - strand, within BPHYT_RS02685 at 603.648 kb on + strand, within BPHYT_RS02685 at 603.794 kb on + strand, within BPHYT_RS02685 at 603.980 kb on + strand, within BPHYT_RS02685 at 604.126 kb on + strand, within BPHYT_RS02685 at 604.163 kb on - strand at 604.184 kb on + strand at 604.186 kb on + strand at 604.186 kb on + strand at 604.187 kb on - strand at 604.293 kb on - strand at 604.293 kb on - strand at 604.293 kb on - strand at 604.580 kb on + strand, within BPHYT_RS02690 at 604.580 kb on + strand, within BPHYT_RS02690 at 604.581 kb on - strand, within BPHYT_RS02690 at 604.622 kb on - strand, within BPHYT_RS02690 at 604.646 kb on + strand, within BPHYT_RS02690 at 604.646 kb on + strand, within BPHYT_RS02690 at 604.646 kb on + strand, within BPHYT_RS02690 at 604.647 kb on - strand, within BPHYT_RS02690 at 604.647 kb on - strand, within BPHYT_RS02690 at 604.648 kb on + strand, within BPHYT_RS02690 at 604.839 kb on - strand, within BPHYT_RS02690 at 604.886 kb on + strand, within BPHYT_RS02690 at 604.886 kb on + strand, within BPHYT_RS02690 at 604.886 kb on + strand, within BPHYT_RS02690 at 604.900 kb on + strand, within BPHYT_RS02690 at 604.910 kb on + strand, within BPHYT_RS02690 at 604.910 kb on + strand, within BPHYT_RS02690 at 604.911 kb on - strand, within BPHYT_RS02690 at 604.973 kb on + strand, within BPHYT_RS02690 at 604.973 kb on + strand, within BPHYT_RS02690 at 604.974 kb on - strand, within BPHYT_RS02690 at 605.150 kb on + strand at 605.151 kb on - strand at 605.347 kb on - strand, within BPHYT_RS02695 at 605.359 kb on + strand, within BPHYT_RS02695 at 605.360 kb on - strand, within BPHYT_RS02695 at 605.526 kb on + strand, within BPHYT_RS02695 at 605.527 kb on - strand, within BPHYT_RS02695 at 605.527 kb on - strand, within BPHYT_RS02695 at 605.650 kb on - strand, within BPHYT_RS02695 at 605.650 kb on - strand, within BPHYT_RS02695 at 605.676 kb on + strand, within BPHYT_RS02695 at 605.676 kb on + strand, within BPHYT_RS02695 at 605.677 kb on - strand, within BPHYT_RS02695 at 605.677 kb on - strand, within BPHYT_RS02695 at 606.107 kb on + strand at 606.107 kb on + strand at 606.108 kb on - strand at 606.111 kb on + strand at 606.112 kb on - strand at 606.125 kb on + strand at 606.125 kb on + strand at 606.126 kb on - strand at 606.126 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 6 vol% remove 603,438 - BPHYT_RS02685 0.28 -2.0 603,499 + BPHYT_RS02685 0.33 -1.3 603,499 + BPHYT_RS02685 0.33 -0.7 603,499 + BPHYT_RS02685 0.33 -0.9 603,522 + BPHYT_RS02685 0.35 -0.9 603,522 + BPHYT_RS02685 0.35 -0.2 603,523 - BPHYT_RS02685 0.36 +0.4 603,523 - BPHYT_RS02685 0.36 -0.7 603,614 - BPHYT_RS02685 0.44 -0.6 603,648 + BPHYT_RS02685 0.47 -0.5 603,794 + BPHYT_RS02685 0.60 -0.7 603,980 + BPHYT_RS02685 0.77 -0.8 604,126 + BPHYT_RS02685 0.90 -0.3 604,163 - -0.0 604,184 + +0.0 604,186 + -0.3 604,186 + -1.0 604,187 - -1.5 604,293 - -1.0 604,293 - -1.8 604,293 - -1.3 604,580 + BPHYT_RS02690 0.37 +0.4 604,580 + BPHYT_RS02690 0.37 -1.2 604,581 - BPHYT_RS02690 0.37 -1.2 604,622 - BPHYT_RS02690 0.42 -1.7 604,646 + BPHYT_RS02690 0.44 -1.6 604,646 + BPHYT_RS02690 0.44 -0.7 604,646 + BPHYT_RS02690 0.44 -1.3 604,647 - BPHYT_RS02690 0.44 -1.4 604,647 - BPHYT_RS02690 0.44 -0.8 604,648 + BPHYT_RS02690 0.45 -1.5 604,839 - BPHYT_RS02690 0.66 -0.8 604,886 + BPHYT_RS02690 0.71 +0.2 604,886 + BPHYT_RS02690 0.71 +0.0 604,886 + BPHYT_RS02690 0.71 -0.7 604,900 + BPHYT_RS02690 0.72 +0.2 604,910 + BPHYT_RS02690 0.74 -1.1 604,910 + BPHYT_RS02690 0.74 -0.1 604,911 - BPHYT_RS02690 0.74 -0.6 604,973 + BPHYT_RS02690 0.80 -0.4 604,973 + BPHYT_RS02690 0.80 -0.8 604,974 - BPHYT_RS02690 0.81 -1.2 605,150 + -2.4 605,151 - -0.9 605,347 - BPHYT_RS02695 0.31 -1.1 605,359 + BPHYT_RS02695 0.33 +0.3 605,360 - BPHYT_RS02695 0.33 -0.9 605,526 + BPHYT_RS02695 0.60 -0.5 605,527 - BPHYT_RS02695 0.60 +0.1 605,527 - BPHYT_RS02695 0.60 +0.5 605,650 - BPHYT_RS02695 0.80 -0.4 605,650 - BPHYT_RS02695 0.80 -0.6 605,676 + BPHYT_RS02695 0.84 +0.6 605,676 + BPHYT_RS02695 0.84 +0.4 605,677 - BPHYT_RS02695 0.85 -1.5 605,677 - BPHYT_RS02695 0.85 -1.5 606,107 + +0.5 606,107 + +0.7 606,108 - -0.3 606,111 + +0.6 606,112 - +0.1 606,125 + +0.2 606,125 + -0.1 606,126 - -0.6 606,126 - +0.2
Or see this region's nucleotide sequence