Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5185

Experiment: Vancomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.12 mg/ml
5,980,960	-		Pf6N2E2_5184	0.70	+0.6
5,981,091	+		Pf6N2E2_5184	0.75	-0.2
5,981,091	+		Pf6N2E2_5184	0.75	-0.8
5,981,091	+		Pf6N2E2_5184	0.75	+0.2
5,981,091	+		Pf6N2E2_5184	0.75	+0.1
5,981,091	+		Pf6N2E2_5184	0.75	+0.5
5,981,092	-		Pf6N2E2_5184	0.75	+0.7
5,981,092	-		Pf6N2E2_5184	0.75	+0.1
5,981,092	-		Pf6N2E2_5184	0.75	-0.7
5,981,092	-		Pf6N2E2_5184	0.75	+0.8
5,981,145	+		Pf6N2E2_5184	0.77	-0.4
5,981,145	+		Pf6N2E2_5184	0.77	+1.7
5,981,146	-		Pf6N2E2_5184	0.77	-1.4
5,981,146	-		Pf6N2E2_5184	0.77	+0.3
5,981,146	-		Pf6N2E2_5184	0.77	+0.3
5,981,146	-		Pf6N2E2_5184	0.77	-0.9
5,981,371	-		Pf6N2E2_5184	0.85	-0.5
5,981,565	+				-1.1
5,981,565	+				+0.1
5,981,565	+				-0.3
5,981,565	+				+1.3
5,981,566	-				-0.8
5,981,566	-				-1.5
5,981,566	-				-1.1
5,981,566	-				-2.8
5,981,566	-				-0.8
5,981,566	-				+1.3
5,981,566	-				-1.8
5,981,586	+				-0.7
5,981,586	+				-0.4
5,981,587	-				+2.4
5,981,587	-				+0.1
5,981,587	-				-0.5
5,981,587	-				-1.6
5,981,613	+				-0.5
5,981,613	+				-0.4
5,981,613	+				-0.9
5,981,683	+				+1.1
5,981,703	+				-0.3
5,981,704	-				-0.3
5,981,896	+		Pf6N2E2_5185	0.14	-1.0
5,981,897	-		Pf6N2E2_5185	0.14	-2.1
5,981,897	-		Pf6N2E2_5185	0.14	-1.2
5,982,038	+		Pf6N2E2_5185	0.34	+0.1
5,982,038	+		Pf6N2E2_5185	0.34	-0.9
5,982,039	-		Pf6N2E2_5185	0.34	-0.9
5,982,118	+		Pf6N2E2_5185	0.46	-1.2
5,982,314	+		Pf6N2E2_5185	0.74	-0.8
5,982,314	+		Pf6N2E2_5185	0.74	-0.2
5,982,314	+		Pf6N2E2_5185	0.74	-0.6
5,982,314	+		Pf6N2E2_5185	0.74	-0.4
5,982,314	+		Pf6N2E2_5185	0.74	-1.3
5,982,315	-		Pf6N2E2_5185	0.74	-0.1
5,982,315	-		Pf6N2E2_5185	0.74	-0.2
5,982,315	-		Pf6N2E2_5185	0.74	-0.3
5,982,317	+		Pf6N2E2_5185	0.74	-0.3
5,982,317	+		Pf6N2E2_5185	0.74	+0.5
5,982,317	+		Pf6N2E2_5185	0.74	-0.4
5,982,317	+		Pf6N2E2_5185	0.74	-0.8
5,982,318	-		Pf6N2E2_5185	0.74	+0.8
5,982,375	-		Pf6N2E2_5185	0.82	-1.7
5,982,405	-		Pf6N2E2_5185	0.87	+0.5
5,982,434	+				-1.5
5,982,484	+				-0.0
5,982,485	-				+0.0
5,982,588	+				+0.0
5,982,588	+				-0.3
5,982,588	+				-0.1
5,982,846	+		Pf6N2E2_5186	0.26	-1.1
5,982,846	+		Pf6N2E2_5186	0.26	-0.9
5,982,846	+		Pf6N2E2_5186	0.26	-0.8
5,982,846	+		Pf6N2E2_5186	0.26	-0.7
5,982,846	+		Pf6N2E2_5186	0.26	-0.9
5,982,847	-				+2.1
5,982,852	+		Pf6N2E2_5186	0.26	-0.8
5,982,852	+		Pf6N2E2_5186	0.26	-1.0
5,982,853	-		Pf6N2E2_5186	0.26	-0.1
5,982,853	-		Pf6N2E2_5186	0.26	-1.3
5,982,853	-		Pf6N2E2_5186	0.26	-1.2
5,982,853	-		Pf6N2E2_5186	0.26	-0.5
5,982,853	-		Pf6N2E2_5186	0.26	+0.2
5,982,853	-		Pf6N2E2_5186	0.26	+0.7
5,982,853	-		Pf6N2E2_5186	0.26	-0.1
5,983,230	+		Pf6N2E2_5186	0.54	-0.7
5,983,231	-		Pf6N2E2_5186	0.54	-1.4
5,983,231	-		Pf6N2E2_5186	0.54	+0.6
5,983,231	-		Pf6N2E2_5186	0.54	-0.1
5,983,231	-		Pf6N2E2_5186	0.54	-0.1
5,983,260	+		Pf6N2E2_5186	0.56	+0.0
5,983,260	+		Pf6N2E2_5186	0.56	+0.6
5,983,432	+		Pf6N2E2_5186	0.68	-1.3
5,983,432	+		Pf6N2E2_5186	0.68	+0.5
5,983,434	+		Pf6N2E2_5186	0.69	-0.8
5,983,434	+		Pf6N2E2_5186	0.69	-0.2
5,983,434	+		Pf6N2E2_5186	0.69	-2.3
5,983,464	+		Pf6N2E2_5186	0.71	-0.3
5,983,464	+		Pf6N2E2_5186	0.71	+0.3
5,983,464	+		Pf6N2E2_5186	0.71	+1.0