Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3979

Experiment: Vancomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.12 mg/ml
4,628,220	-		Pf6N2E2_3978	0.57	+0.6
4,628,324	+		Pf6N2E2_3978	0.65	-0.5
4,628,324	+		Pf6N2E2_3978	0.65	-0.9
4,628,324	+		Pf6N2E2_3978	0.65	-0.5
4,628,325	-		Pf6N2E2_3978	0.65	+0.7
4,628,325	-		Pf6N2E2_3978	0.65	-0.5
4,628,325	-		Pf6N2E2_3978	0.65	-2.3
4,628,814	+				+0.3
4,628,814	+				-0.4
4,628,814	+				-2.3
4,628,814	+				-0.4
4,628,814	+				-1.1
4,628,814	+				+0.1
4,628,815	-				-2.5
4,628,815	-				-0.1
4,628,815	-				+0.3
4,628,815	-				-0.1
4,629,282	+		Pf6N2E2_3979	0.22	-0.1
4,629,282	+		Pf6N2E2_3979	0.22	-0.5
4,629,282	+		Pf6N2E2_3979	0.22	+1.0
4,629,283	-		Pf6N2E2_3979	0.22	-0.2
4,629,294	+		Pf6N2E2_3979	0.22	+0.2
4,629,295	-		Pf6N2E2_3979	0.22	-0.6
4,629,295	-		Pf6N2E2_3979	0.22	-0.5
4,629,341	+		Pf6N2E2_3979	0.24	-0.9
4,629,341	+		Pf6N2E2_3979	0.24	-1.5
4,629,367	-		Pf6N2E2_3979	0.26	-0.7
4,629,687	+		Pf6N2E2_3979	0.40	-0.8
4,629,687	+		Pf6N2E2_3979	0.40	-1.5
4,629,687	+		Pf6N2E2_3979	0.40	-0.3
4,629,687	+		Pf6N2E2_3979	0.40	+0.5
4,629,687	+		Pf6N2E2_3979	0.40	-0.6
4,629,687	+		Pf6N2E2_3979	0.40	+0.8
4,629,688	-		Pf6N2E2_3979	0.40	-1.0
4,629,688	-		Pf6N2E2_3979	0.40	+0.4
4,629,688	-		Pf6N2E2_3979	0.40	-1.1
4,629,688	-		Pf6N2E2_3979	0.40	-1.2
4,629,688	-		Pf6N2E2_3979	0.40	-0.5
4,629,688	-		Pf6N2E2_3979	0.40	-0.7
4,629,736	-		Pf6N2E2_3979	0.43	-0.6
4,629,736	-		Pf6N2E2_3979	0.43	-1.6
4,630,003	-		Pf6N2E2_3979	0.55	+0.2
4,630,213	+		Pf6N2E2_3979	0.65	-1.4
4,630,214	-		Pf6N2E2_3979	0.65	-0.3
4,630,214	-		Pf6N2E2_3979	0.65	-0.5
4,630,289	-		Pf6N2E2_3979	0.68	+0.3
4,630,320	+		Pf6N2E2_3979	0.70	-0.9
4,630,320	+		Pf6N2E2_3979	0.70	-1.3
4,630,321	-		Pf6N2E2_3979	0.70	-0.1
4,630,321	-		Pf6N2E2_3979	0.70	-1.3
4,630,333	+		Pf6N2E2_3979	0.70	-0.5
4,630,389	+		Pf6N2E2_3979	0.73	+0.6
4,630,464	+		Pf6N2E2_3979	0.76	-0.1
4,630,465	-		Pf6N2E2_3979	0.76	-1.7
4,630,465	-		Pf6N2E2_3979	0.76	-0.9
4,630,581	+		Pf6N2E2_3979	0.82	-0.5
4,630,581	+		Pf6N2E2_3979	0.82	-1.3
4,630,800	-				-1.7
4,630,800	-				-1.9
4,630,940	+				+0.8
4,630,940	+				-0.0
4,630,941	-				+0.0
4,630,989	+				-0.7
4,630,989	+				-1.1
4,630,989	+				-1.9
4,631,001	+				-1.8
4,631,001	+				-1.6
4,631,002	-				-0.6
4,631,002	-				-0.1
4,631,002	-				-0.7
4,631,002	-				+0.5
4,631,242	+		Pf6N2E2_3980	0.17	-1.5
4,631,275	+		Pf6N2E2_3980	0.20	+0.1
4,631,275	+		Pf6N2E2_3980	0.20	-0.4
4,631,275	+		Pf6N2E2_3980	0.20	-0.0
4,631,275	+		Pf6N2E2_3980	0.20	+0.6
4,631,276	-		Pf6N2E2_3980	0.20	-1.2
4,631,276	-		Pf6N2E2_3980	0.20	-1.3
4,631,276	-		Pf6N2E2_3980	0.20	-3.2
4,631,276	-		Pf6N2E2_3980	0.20	-0.6
4,631,276	-		Pf6N2E2_3980	0.20	-1.5
4,631,276	-		Pf6N2E2_3980	0.20	-0.5
4,631,276	-		Pf6N2E2_3980	0.20	-1.3
4,631,276	-		Pf6N2E2_3980	0.20	-1.3
4,631,395	+		Pf6N2E2_3980	0.29	-1.2
4,631,395	+		Pf6N2E2_3980	0.29	-2.3
4,631,395	+		Pf6N2E2_3980	0.29	-0.6
4,631,396	-		Pf6N2E2_3980	0.29	-0.4
4,631,396	-		Pf6N2E2_3980	0.29	-1.5
4,631,396	-		Pf6N2E2_3980	0.29	-1.1
4,631,437	+		Pf6N2E2_3980	0.32	-0.4
4,631,437	+		Pf6N2E2_3980	0.32	+0.1
4,631,437	+		Pf6N2E2_3980	0.32	-1.8
4,631,437	+		Pf6N2E2_3980	0.32	-1.2
4,631,545	+		Pf6N2E2_3980	0.40	-1.8
4,631,569	+		Pf6N2E2_3980	0.42	-2.1
4,631,569	+		Pf6N2E2_3980	0.42	+0.3
4,631,569	+		Pf6N2E2_3980	0.42	-0.4
4,631,570	-		Pf6N2E2_3980	0.42	-1.2
4,631,728	+		Pf6N2E2_3980	0.53	-0.4
4,631,728	+		Pf6N2E2_3980	0.53	-1.3
4,631,728	+		Pf6N2E2_3980	0.53	-1.3
4,631,728	+		Pf6N2E2_3980	0.53	-1.0
4,631,729	-		Pf6N2E2_3980	0.53	-0.1
4,631,729	-		Pf6N2E2_3980	0.53	-0.3
4,631,729	-		Pf6N2E2_3980	0.53	-0.6