Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3978

Experiment: Vancomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.12 mg/ml
4,626,589	+		Pf6N2E2_3977	0.41	+0.3
4,626,589	+		Pf6N2E2_3977	0.41	+0.4
4,626,589	+		Pf6N2E2_3977	0.41	-0.7
4,626,742	+		Pf6N2E2_3977	0.58	+0.1
4,626,742	+		Pf6N2E2_3977	0.58	+0.5
4,626,743	-		Pf6N2E2_3977	0.58	+1.9
4,626,743	-		Pf6N2E2_3977	0.58	+0.7
4,626,743	-		Pf6N2E2_3977	0.58	-0.7
4,626,743	-		Pf6N2E2_3977	0.58	-0.5
4,626,743	-		Pf6N2E2_3977	0.58	-0.2
4,626,917	+		Pf6N2E2_3977	0.77	+0.6
4,627,111	+				+1.5
4,627,111	+				-0.1
4,627,112	-				+0.4
4,627,127	+				+1.1
4,627,127	+				-0.2
4,627,127	+				-0.0
4,627,127	+				+0.3
4,627,127	+				-0.5
4,627,127	+				-0.4
4,627,128	-				+0.2
4,627,128	-				+0.6
4,627,128	-				+0.8
4,627,128	-				+0.6
4,627,128	-				+1.2
4,627,128	-				+0.3
4,627,128	-				+0.6
4,627,128	-				-0.1
4,627,233	+				+0.3
4,627,234	-				+1.4
4,627,234	-				+0.9
4,627,234	-				-0.3
4,627,254	+				-0.6
4,627,255	-				+0.3
4,627,259	+				+1.0
4,627,428	+				+0.8
4,627,457	+				+0.3
4,627,508	+				-0.9
4,627,508	+				+0.5
4,627,508	+				-0.8
4,627,508	+				-0.9
4,627,508	+				-1.1
4,627,509	-				-1.1
4,627,628	+		Pf6N2E2_3978	0.13	-0.2
4,627,628	+		Pf6N2E2_3978	0.13	-0.4
4,627,628	+		Pf6N2E2_3978	0.13	-1.1
4,627,628	+		Pf6N2E2_3978	0.13	-2.0
4,627,628	+		Pf6N2E2_3978	0.13	-0.7
4,627,628	+		Pf6N2E2_3978	0.13	-0.8
4,627,629	-		Pf6N2E2_3978	0.13	-0.2
4,627,629	-		Pf6N2E2_3978	0.13	-1.5
4,627,629	-		Pf6N2E2_3978	0.13	+0.2
4,627,629	-		Pf6N2E2_3978	0.13	-1.8
4,627,629	-		Pf6N2E2_3978	0.13	-1.4
4,627,629	-		Pf6N2E2_3978	0.13	-1.1
4,627,629	-		Pf6N2E2_3978	0.13	+0.5
4,627,629	-		Pf6N2E2_3978	0.13	-1.5
4,627,629	-		Pf6N2E2_3978	0.13	+2.8
4,627,631	+		Pf6N2E2_3978	0.13	-0.7
4,627,631	+		Pf6N2E2_3978	0.13	-0.2
4,627,631	+		Pf6N2E2_3978	0.13	+0.3
4,627,631	+		Pf6N2E2_3978	0.13	-0.7
4,627,631	+		Pf6N2E2_3978	0.13	-1.4
4,627,631	+		Pf6N2E2_3978	0.13	-2.1
4,627,631	+		Pf6N2E2_3978	0.13	-1.1
4,627,631	+		Pf6N2E2_3978	0.13	-0.2
4,627,631	+		Pf6N2E2_3978	0.13	-2.5
4,627,631	+		Pf6N2E2_3978	0.13	-0.4
4,627,631	+		Pf6N2E2_3978	0.13	-0.4
4,627,631	+		Pf6N2E2_3978	0.13	-2.0
4,627,631	+		Pf6N2E2_3978	0.13	-0.1
4,627,632	-		Pf6N2E2_3978	0.13	-0.5
4,627,632	-		Pf6N2E2_3978	0.13	-1.0
4,627,632	-		Pf6N2E2_3978	0.13	-1.2
4,627,632	-		Pf6N2E2_3978	0.13	-3.0
4,627,635	+		Pf6N2E2_3978	0.13	-0.9
4,627,636	-		Pf6N2E2_3978	0.13	+0.5
4,627,636	-		Pf6N2E2_3978	0.13	+0.0
4,627,636	-		Pf6N2E2_3978	0.13	-0.2
4,627,636	-		Pf6N2E2_3978	0.13	+0.3
4,627,636	-		Pf6N2E2_3978	0.13	-1.1
4,627,636	-		Pf6N2E2_3978	0.13	-1.4
4,627,703	+		Pf6N2E2_3978	0.18	-0.2
4,627,704	-		Pf6N2E2_3978	0.19	-0.3
4,627,704	-		Pf6N2E2_3978	0.19	+1.3
4,627,704	-		Pf6N2E2_3978	0.19	-0.4
4,627,704	-		Pf6N2E2_3978	0.19	-0.4
4,627,712	+		Pf6N2E2_3978	0.19	-0.6
4,627,719	-		Pf6N2E2_3978	0.20	-1.5
4,628,220	-		Pf6N2E2_3978	0.57	+0.6
4,628,324	+		Pf6N2E2_3978	0.65	-0.5
4,628,324	+		Pf6N2E2_3978	0.65	-0.9
4,628,324	+		Pf6N2E2_3978	0.65	-0.5
4,628,325	-		Pf6N2E2_3978	0.65	+0.7
4,628,325	-		Pf6N2E2_3978	0.65	-0.5
4,628,325	-		Pf6N2E2_3978	0.65	-2.3
4,628,814	+				+0.3
4,628,814	+				-0.4
4,628,814	+				-2.3
4,628,814	+				-0.4
4,628,814	+				-1.1
4,628,814	+				+0.1
4,628,815	-				-2.5
4,628,815	-				-0.1
4,628,815	-				+0.3
4,628,815	-				-0.1
4,629,282	+		Pf6N2E2_3979	0.22	-0.1
4,629,282	+		Pf6N2E2_3979	0.22	-0.5
4,629,282	+		Pf6N2E2_3979	0.22	+1.0
4,629,283	-		Pf6N2E2_3979	0.22	-0.2
4,629,294	+		Pf6N2E2_3979	0.22	+0.2
4,629,295	-		Pf6N2E2_3979	0.22	-0.6
4,629,295	-		Pf6N2E2_3979	0.22	-0.5
4,629,341	+		Pf6N2E2_3979	0.24	-0.9
4,629,341	+		Pf6N2E2_3979	0.24	-1.5
4,629,367	-		Pf6N2E2_3979	0.26	-0.7
4,629,687	+		Pf6N2E2_3979	0.40	-0.8
4,629,687	+		Pf6N2E2_3979	0.40	-1.5
4,629,687	+		Pf6N2E2_3979	0.40	-0.3
4,629,687	+		Pf6N2E2_3979	0.40	+0.5
4,629,687	+		Pf6N2E2_3979	0.40	-0.6
4,629,687	+		Pf6N2E2_3979	0.40	+0.8
4,629,688	-		Pf6N2E2_3979	0.40	-1.0
4,629,688	-		Pf6N2E2_3979	0.40	+0.4
4,629,688	-		Pf6N2E2_3979	0.40	-1.1
4,629,688	-		Pf6N2E2_3979	0.40	-1.2
4,629,688	-		Pf6N2E2_3979	0.40	-0.5
4,629,688	-		Pf6N2E2_3979	0.40	-0.7
4,629,736	-		Pf6N2E2_3979	0.43	-0.6
4,629,736	-		Pf6N2E2_3979	0.43	-1.6