Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2627

Experiment: Vancomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.12 mg/ml
3,088,058	+				+0.1
3,088,058	+				-0.2
3,088,058	+				-0.8
3,088,059	-				+0.5
3,088,078	+				+0.9
3,088,079	-				-0.2
3,088,159	+		Pf6N2E2_2626	0.12	+0.1
3,088,159	+		Pf6N2E2_2626	0.12	-0.2
3,088,159	+		Pf6N2E2_2626	0.12	+0.5
3,088,199	+		Pf6N2E2_2626	0.18	-0.5
3,088,199	+		Pf6N2E2_2626	0.18	+0.6
3,088,199	+		Pf6N2E2_2626	0.18	+0.8
3,088,199	+		Pf6N2E2_2626	0.18	-0.2
3,088,199	+		Pf6N2E2_2626	0.18	+1.0
3,088,199	+		Pf6N2E2_2626	0.18	+0.3
3,088,199	+		Pf6N2E2_2626	0.18	+0.2
3,088,200	-		Pf6N2E2_2626	0.18	-0.4
3,088,200	-		Pf6N2E2_2626	0.18	+1.1
3,088,200	-		Pf6N2E2_2626	0.18	+0.1
3,088,200	-		Pf6N2E2_2626	0.18	-0.7
3,088,209	-		Pf6N2E2_2626	0.19	-0.6
3,088,597	+		Pf6N2E2_2626	0.75	+0.1
3,088,598	-		Pf6N2E2_2626	0.75	-0.2
3,088,624	+		Pf6N2E2_2626	0.79	+0.5
3,088,681	+		Pf6N2E2_2626	0.87	+0.1
3,088,681	+		Pf6N2E2_2626	0.87	-0.7
3,088,682	-		Pf6N2E2_2626	0.87	-0.5
3,088,682	-		Pf6N2E2_2626	0.87	+0.3
3,088,682	-		Pf6N2E2_2626	0.87	-0.3
3,088,684	+		Pf6N2E2_2626	0.87	+0.0
3,088,685	-		Pf6N2E2_2626	0.87	+0.1
3,088,685	-		Pf6N2E2_2626	0.87	+0.7
3,088,685	-		Pf6N2E2_2626	0.87	-0.2
3,088,758	+				-0.7
3,088,758	+				+0.1
3,088,758	+				+0.2
3,088,758	+				+0.4
3,088,759	-				-1.2
3,088,759	-				-1.0
3,088,778	+				-1.1
3,088,778	+				+0.0
3,088,778	+				-0.7
3,088,779	-				-0.6
3,088,818	+				-0.4
3,088,818	+				+0.5
3,088,819	-				+0.3
3,088,819	-				-0.5
3,088,819	-				-1.3
3,088,910	+				-0.8
3,089,050	+		Pf6N2E2_2627	0.26	-0.7
3,089,274	+		Pf6N2E2_2627	0.55	-0.1
3,089,275	-		Pf6N2E2_2627	0.55	-0.5
3,089,275	-		Pf6N2E2_2627	0.55	-0.8
3,089,288	+		Pf6N2E2_2627	0.57	-1.2
3,089,288	+		Pf6N2E2_2627	0.57	-1.6
3,089,289	-		Pf6N2E2_2627	0.57	-0.7
3,089,485	+		Pf6N2E2_2627	0.82	+0.3
3,089,492	+		Pf6N2E2_2627	0.83	-2.2
3,089,492	+		Pf6N2E2_2627	0.83	-1.1
3,089,493	-		Pf6N2E2_2627	0.83	-0.2
3,089,565	+				-0.5
3,089,565	+				-0.8
3,089,566	-				-0.3
3,089,614	+				-0.5
3,089,642	+				+1.1
3,089,642	+				+0.5
3,089,672	+				+0.5
3,089,672	+				-0.3
3,089,672	+				-0.3
3,089,672	+				-2.5
3,089,673	-				-0.9
3,089,673	-				+0.1
3,089,679	+				+0.9
3,089,679	+				-1.1
3,089,679	+				-2.3
3,090,120	+		Pf6N2E2_2628	0.60	+0.2
3,090,120	+		Pf6N2E2_2628	0.60	-1.8
3,090,120	+		Pf6N2E2_2628	0.60	+0.3
3,090,120	+		Pf6N2E2_2628	0.60	+0.3
3,090,121	-		Pf6N2E2_2628	0.60	-0.4
3,090,121	-		Pf6N2E2_2628	0.60	-1.2
3,090,121	-		Pf6N2E2_2628	0.60	-0.4
3,090,399	+				+0.1
3,090,399	+				-1.0
3,090,399	+				+0.7
3,090,399	+				-2.1
3,090,399	+				-1.2
3,090,399	+				+1.1
3,090,400	-				+0.9
3,090,400	-				-0.6
3,090,400	-				-0.7
3,090,400	-				+0.3
3,090,400	-				+0.9
3,090,400	-				+0.4
3,090,400	-				-0.3
3,090,400	-				-0.8
3,090,400	-				-0.1
3,090,400	-				-0.5
3,090,400	-				-0.1
3,090,400	-				-0.3
3,090,405	+				-2.7
3,090,405	+				-0.6
3,090,405	+				+0.2
3,090,405	+				-0.4
3,090,405	+				+0.2
3,090,405	+				-1.9
3,090,405	+				-0.8
3,090,405	+				-0.5
3,090,405	+				+0.3
3,090,406	-				-0.2
3,090,406	-				-1.3
3,090,406	-				+1.3
3,090,406	-				-0.4
3,090,406	-				-0.5
3,090,406	-				-0.5
3,090,406	-				-1.5
3,090,406	-				-0.1
3,090,557	+				+0.1
3,090,557	+				-1.4
3,090,558	-				+0.6
3,090,606	+				-0.3
3,090,606	+				+0.3