Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2503
Experiment: Vancomycin 0.12 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Vancomycin 0.12 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,952,013 | + | Pf6N2E2_2502 | 0.72 | -0.7 | |
| 2,952,218 | + | Pf6N2E2_2502 | 0.83 | -0.0 | |
| 2,952,330 | + | Pf6N2E2_2502 | 0.89 | -0.8 | |
| 2,952,332 | + | Pf6N2E2_2502 | 0.89 | +0.5 | |
| 2,952,400 | + | -0.3 | |||
| 2,952,492 | + | +0.2 | |||
| 2,952,492 | + | +0.2 | |||
| 2,952,557 | + | +0.8 | |||
| 2,952,577 | + | -0.3 | |||
| 2,952,577 | + | +0.3 | |||
| 2,952,577 | + | +1.4 | |||
| 2,952,722 | + | -1.2 | |||
| 2,952,750 | + | +0.4 | |||
| 2,952,751 | - | +0.1 | |||
| 2,952,813 | + | -0.1 | |||
| 2,952,814 | - | -1.6 | |||
| 2,952,814 | - | +0.4 | |||
| 2,952,814 | - | +0.7 | |||
| 2,953,979 | - | Pf6N2E2_2503 | 0.89 | +0.8 | |
| 2,953,984 | - | Pf6N2E2_2503 | 0.90 | +0.6 | |
| 2,954,018 | - | +1.9 | |||
| 2,954,209 | - | +0.9 | |||
| 2,954,683 | - | Pf6N2E2_2504 | 0.10 | +1.2 |
Or see this region's nucleotide sequence