Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1238

Experiment: Vancomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.12 mg/ml
1,450,800	+		Pf6N2E2_1237	0.52	-0.4
1,450,873	-		Pf6N2E2_1237	0.57	+0.6
1,450,940	+		Pf6N2E2_1237	0.62	-0.2
1,450,940	+		Pf6N2E2_1237	0.62	-0.1
1,450,941	-		Pf6N2E2_1237	0.62	+1.3
1,451,026	-		Pf6N2E2_1237	0.68	+1.3
1,451,129	-		Pf6N2E2_1237	0.75	-0.9
1,451,147	+		Pf6N2E2_1237	0.76	+0.6
1,451,180	+		Pf6N2E2_1237	0.78	-0.3
1,451,226	+		Pf6N2E2_1237	0.81	-1.4
1,451,227	-		Pf6N2E2_1237	0.81	+0.9
1,451,227	-		Pf6N2E2_1237	0.81	+0.3
1,451,601	+				-0.6
1,451,608	-				-0.5
1,451,620	+				+1.5
1,451,620	+				+0.3
1,451,717	+				+0.1
1,451,717	+				+0.5
1,451,717	+				-0.5
1,451,717	+				-0.2
1,451,717	+				+0.6
1,451,718	-				+0.8
1,451,718	-				+0.2
1,451,740	+				-0.3
1,451,899	+		Pf6N2E2_1238	0.62	-1.1
1,451,935	+		Pf6N2E2_1238	0.81	-1.2
1,451,935	+		Pf6N2E2_1238	0.81	-0.7
1,451,967	+				-0.4
1,451,967	+				+0.1
1,451,967	+				+2.2
1,451,967	+				+1.0
1,451,968	-				+1.7
1,451,968	-				-0.1
1,451,988	+				-0.3
1,451,989	-				+1.9
1,452,069	-				-0.1
1,452,084	+				-1.2
1,452,084	+				-0.6
1,452,084	+				-0.0
1,452,084	+				+0.0
1,452,084	+				+1.0
1,452,084	+				-0.5
1,452,084	+				+0.1
1,452,084	+				+0.2
1,452,084	+				+0.3
1,452,085	-				-0.7
1,452,085	-				-0.1
1,452,085	-				+1.4
1,452,085	-				+1.1
1,452,085	-				+0.4
1,452,085	-				+0.9
1,452,085	-				-0.8
1,452,085	-				-0.2
1,452,085	-				-0.2
1,452,085	-				+0.8
1,452,086	+				+0.5
1,452,130	+				+0.7
1,452,130	+				-1.2
1,452,130	+				-1.2
1,452,131	-				+0.8
1,452,189	-				+0.7
1,452,296	-				-0.8
1,452,296	-				+0.1
1,452,303	+				+0.0
1,452,303	+				-1.0
1,452,304	-				-0.1
1,452,304	-				+0.6
1,452,307	+				-0.3
1,452,308	-		Pf6N2E2_1239	0.10	+0.7
1,452,308	-		Pf6N2E2_1239	0.10	-1.1
1,452,308	-		Pf6N2E2_1239	0.10	-0.2
1,452,308	-		Pf6N2E2_1239	0.10	-1.5
1,452,308	-		Pf6N2E2_1239	0.10	-0.2
1,452,308	-		Pf6N2E2_1239	0.10	+0.9
1,452,308	-		Pf6N2E2_1239	0.10	+0.2
1,452,308	-		Pf6N2E2_1239	0.10	+1.0
1,452,308	-		Pf6N2E2_1239	0.10	-0.1
1,452,332	-		Pf6N2E2_1239	0.14	-0.8
1,452,332	-		Pf6N2E2_1239	0.14	-0.1
1,452,332	-		Pf6N2E2_1239	0.14	-1.9
1,452,332	-		Pf6N2E2_1239	0.14	+0.2
1,452,332	-		Pf6N2E2_1239	0.14	+0.9
1,452,332	-		Pf6N2E2_1239	0.14	-0.3
1,452,332	-		Pf6N2E2_1239	0.14	+0.4
1,452,332	-		Pf6N2E2_1239	0.14	+0.2
1,452,335	+		Pf6N2E2_1239	0.14	+0.0
1,452,556	-		Pf6N2E2_1239	0.47	-0.1
1,452,556	-		Pf6N2E2_1239	0.47	+0.1
1,452,556	-		Pf6N2E2_1239	0.47	+0.1
1,452,617	-		Pf6N2E2_1239	0.56	+2.3
1,452,787	+		Pf6N2E2_1239	0.81	+0.7
1,452,832	+		Pf6N2E2_1239	0.88	+0.5
1,452,832	+		Pf6N2E2_1239	0.88	+0.2
1,452,833	-		Pf6N2E2_1239	0.88	+1.7
1,452,955	+				-1.2
1,452,955	+				-3.4
1,452,955	+				+0.6
1,452,956	-				+0.2
1,452,956	-				-0.2
1,452,969	+				-0.1