Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS01450 and CA265_RS01455 are separated by 4 nucleotides CA265_RS01455 and CA265_RS01460 are separated by 54 nucleotides CA265_RS01460 and CA265_RS01465 are separated by 338 nucleotides
CA265_RS01450: CA265_RS01450 - hypothetical protein, at 368,797 to 371,172
_RS01450
CA265_RS01455: CA265_RS01455 - MFS transporter, at 371,177 to 372,418
_RS01455
CA265_RS01460: CA265_RS01460 - hypothetical protein, at 372,473 to 372,841
_RS01460
CA265_RS01465: CA265_RS01465 - hypothetical protein, at 373,180 to 373,386
_RS01465
Position (kb) 371
372
373 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 370.204 kb on + strand, within CA265_RS01450 at 370.204 kb on + strand, within CA265_RS01450 at 370.205 kb on - strand, within CA265_RS01450 at 370.205 kb on - strand, within CA265_RS01450 at 370.249 kb on - strand, within CA265_RS01450 at 370.257 kb on + strand, within CA265_RS01450 at 370.333 kb on - strand, within CA265_RS01450 at 370.333 kb on - strand, within CA265_RS01450 at 370.396 kb on - strand, within CA265_RS01450 at 370.483 kb on - strand, within CA265_RS01450 at 370.483 kb on - strand, within CA265_RS01450 at 370.486 kb on - strand, within CA265_RS01450 at 370.651 kb on - strand, within CA265_RS01450 at 370.767 kb on - strand, within CA265_RS01450 at 370.809 kb on + strand, within CA265_RS01450 at 370.810 kb on - strand, within CA265_RS01450 at 370.839 kb on - strand, within CA265_RS01450 at 370.843 kb on + strand, within CA265_RS01450 at 370.843 kb on + strand, within CA265_RS01450 at 370.917 kb on - strand, within CA265_RS01450 at 370.917 kb on - strand, within CA265_RS01450 at 371.027 kb on + strand at 371.045 kb on - strand at 371.058 kb on + strand at 371.058 kb on + strand at 371.126 kb on + strand at 371.126 kb on + strand at 371.153 kb on + strand at 371.165 kb on - strand at 371.165 kb on - strand at 371.165 kb on - strand at 371.170 kb on + strand at 371.210 kb on + strand at 371.211 kb on - strand at 371.211 kb on - strand at 371.219 kb on - strand at 371.219 kb on - strand at 371.260 kb on + strand at 371.260 kb on + strand at 371.260 kb on + strand at 371.261 kb on - strand at 371.265 kb on - strand at 371.265 kb on - strand at 371.265 kb on - strand at 371.341 kb on - strand, within CA265_RS01455 at 371.354 kb on - strand, within CA265_RS01455 at 371.409 kb on + strand, within CA265_RS01455 at 371.439 kb on + strand, within CA265_RS01455 at 371.440 kb on - strand, within CA265_RS01455 at 371.449 kb on + strand, within CA265_RS01455 at 371.453 kb on - strand, within CA265_RS01455 at 371.507 kb on + strand, within CA265_RS01455 at 371.508 kb on - strand, within CA265_RS01455 at 371.508 kb on - strand, within CA265_RS01455 at 371.566 kb on + strand, within CA265_RS01455 at 371.566 kb on + strand, within CA265_RS01455 at 371.606 kb on - strand, within CA265_RS01455 at 371.606 kb on - strand, within CA265_RS01455 at 371.719 kb on - strand, within CA265_RS01455 at 371.770 kb on + strand, within CA265_RS01455 at 371.824 kb on + strand, within CA265_RS01455 at 371.825 kb on - strand, within CA265_RS01455 at 371.825 kb on - strand, within CA265_RS01455 at 371.835 kb on + strand, within CA265_RS01455 at 371.848 kb on + strand, within CA265_RS01455 at 371.854 kb on + strand, within CA265_RS01455 at 371.928 kb on + strand, within CA265_RS01455 at 371.933 kb on - strand, within CA265_RS01455 at 371.985 kb on + strand, within CA265_RS01455 at 371.985 kb on + strand, within CA265_RS01455 at 372.013 kb on - strand, within CA265_RS01455 at 372.021 kb on - strand, within CA265_RS01455 at 372.023 kb on + strand, within CA265_RS01455 at 372.049 kb on - strand, within CA265_RS01455 at 372.052 kb on + strand, within CA265_RS01455 at 372.053 kb on - strand, within CA265_RS01455 at 372.053 kb on - strand, within CA265_RS01455 at 372.085 kb on - strand, within CA265_RS01455 at 372.085 kb on - strand, within CA265_RS01455 at 372.085 kb on - strand, within CA265_RS01455 at 372.125 kb on + strand, within CA265_RS01455 at 372.125 kb on + strand, within CA265_RS01455 at 372.144 kb on + strand, within CA265_RS01455 at 372.241 kb on + strand, within CA265_RS01455 at 372.246 kb on + strand, within CA265_RS01455 at 372.264 kb on + strand, within CA265_RS01455 at 372.278 kb on + strand, within CA265_RS01455 at 372.300 kb on + strand at 372.322 kb on + strand at 372.323 kb on - strand at 372.427 kb on - strand at 372.552 kb on + strand, within CA265_RS01460 at 372.568 kb on + strand, within CA265_RS01460 at 372.609 kb on + strand, within CA265_RS01460 at 372.651 kb on - strand, within CA265_RS01460 at 372.679 kb on + strand, within CA265_RS01460 at 372.734 kb on + strand, within CA265_RS01460 at 372.735 kb on - strand, within CA265_RS01460 at 372.735 kb on - strand, within CA265_RS01460 at 372.742 kb on - strand, within CA265_RS01460 at 372.742 kb on - strand, within CA265_RS01460 at 372.742 kb on - strand, within CA265_RS01460 at 372.742 kb on - strand, within CA265_RS01460 at 372.779 kb on - strand, within CA265_RS01460 at 372.881 kb on - strand at 372.916 kb on - strand at 372.941 kb on + strand at 372.942 kb on - strand at 372.943 kb on + strand at 372.965 kb on + strand at 372.966 kb on - strand at 372.969 kb on - strand at 372.985 kb on - strand at 373.026 kb on - strand at 373.027 kb on + strand at 373.127 kb on - strand at 373.130 kb on + strand at 373.206 kb on + strand, within CA265_RS01465 at 373.224 kb on + strand, within CA265_RS01465 at 373.225 kb on - strand, within CA265_RS01465 at 373.225 kb on - strand, within CA265_RS01465 at 373.244 kb on + strand, within CA265_RS01465 at 373.246 kb on + strand, within CA265_RS01465 at 373.248 kb on + strand, within CA265_RS01465 at 373.248 kb on + strand, within CA265_RS01465 at 373.322 kb on - strand, within CA265_RS01465 at 373.322 kb on - strand, within CA265_RS01465 at 373.336 kb on - strand, within CA265_RS01465
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 370,204 + CA265_RS01450 0.59 -0.7 370,204 + CA265_RS01450 0.59 -0.7 370,205 - CA265_RS01450 0.59 +0.1 370,205 - CA265_RS01450 0.59 +0.3 370,249 - CA265_RS01450 0.61 +0.5 370,257 + CA265_RS01450 0.61 -0.2 370,333 - CA265_RS01450 0.65 +0.3 370,333 - CA265_RS01450 0.65 +0.8 370,396 - CA265_RS01450 0.67 -0.8 370,483 - CA265_RS01450 0.71 +0.5 370,483 - CA265_RS01450 0.71 +1.1 370,486 - CA265_RS01450 0.71 +0.1 370,651 - CA265_RS01450 0.78 -1.1 370,767 - CA265_RS01450 0.83 +0.1 370,809 + CA265_RS01450 0.85 +0.2 370,810 - CA265_RS01450 0.85 -0.2 370,839 - CA265_RS01450 0.86 +0.9 370,843 + CA265_RS01450 0.86 -0.3 370,843 + CA265_RS01450 0.86 -0.2 370,917 - CA265_RS01450 0.89 +0.0 370,917 - CA265_RS01450 0.89 -0.4 371,027 + +0.5 371,045 - +1.0 371,058 + +0.4 371,058 + -0.1 371,126 + -0.1 371,126 + +0.5 371,153 + -0.3 371,165 - +0.7 371,165 - +0.0 371,165 - +0.3 371,170 + -0.3 371,210 + +0.4 371,211 - +0.2 371,211 - -0.0 371,219 - -0.4 371,219 - -0.6 371,260 + -2.4 371,260 + -1.0 371,260 + -0.2 371,261 - +0.2 371,265 - +1.0 371,265 - -1.5 371,265 - +0.2 371,341 - CA265_RS01455 0.13 -0.3 371,354 - CA265_RS01455 0.14 +0.8 371,409 + CA265_RS01455 0.19 +1.3 371,439 + CA265_RS01455 0.21 -0.8 371,440 - CA265_RS01455 0.21 +0.6 371,449 + CA265_RS01455 0.22 -0.0 371,453 - CA265_RS01455 0.22 +0.2 371,507 + CA265_RS01455 0.27 +0.2 371,508 - CA265_RS01455 0.27 -0.1 371,508 - CA265_RS01455 0.27 +0.1 371,566 + CA265_RS01455 0.31 -0.6 371,566 + CA265_RS01455 0.31 +0.6 371,606 - CA265_RS01455 0.35 -0.8 371,606 - CA265_RS01455 0.35 -0.7 371,719 - CA265_RS01455 0.44 -0.2 371,770 + CA265_RS01455 0.48 -1.7 371,824 + CA265_RS01455 0.52 -0.7 371,825 - CA265_RS01455 0.52 -0.7 371,825 - CA265_RS01455 0.52 +0.7 371,835 + CA265_RS01455 0.53 -0.1 371,848 + CA265_RS01455 0.54 +0.8 371,854 + CA265_RS01455 0.55 -1.4 371,928 + CA265_RS01455 0.60 -0.6 371,933 - CA265_RS01455 0.61 -0.1 371,985 + CA265_RS01455 0.65 -0.7 371,985 + CA265_RS01455 0.65 -0.6 372,013 - CA265_RS01455 0.67 -0.1 372,021 - CA265_RS01455 0.68 +0.7 372,023 + CA265_RS01455 0.68 -2.8 372,049 - CA265_RS01455 0.70 -0.4 372,052 + CA265_RS01455 0.70 +0.3 372,053 - CA265_RS01455 0.71 -0.2 372,053 - CA265_RS01455 0.71 +0.3 372,085 - CA265_RS01455 0.73 -0.6 372,085 - CA265_RS01455 0.73 +0.0 372,085 - CA265_RS01455 0.73 -0.3 372,125 + CA265_RS01455 0.76 -1.9 372,125 + CA265_RS01455 0.76 -0.3 372,144 + CA265_RS01455 0.78 -0.7 372,241 + CA265_RS01455 0.86 -0.1 372,246 + CA265_RS01455 0.86 -1.1 372,264 + CA265_RS01455 0.88 +0.1 372,278 + CA265_RS01455 0.89 -0.1 372,300 + +0.0 372,322 + -0.2 372,323 - -0.2 372,427 - +0.2 372,552 + CA265_RS01460 0.21 -0.7 372,568 + CA265_RS01460 0.26 +0.2 372,609 + CA265_RS01460 0.37 -1.0 372,651 - CA265_RS01460 0.48 +0.1 372,679 + CA265_RS01460 0.56 -0.5 372,734 + CA265_RS01460 0.71 +0.0 372,735 - CA265_RS01460 0.71 +0.2 372,735 - CA265_RS01460 0.71 +0.7 372,742 - CA265_RS01460 0.73 -0.9 372,742 - CA265_RS01460 0.73 +0.9 372,742 - CA265_RS01460 0.73 +0.4 372,742 - CA265_RS01460 0.73 -0.0 372,779 - CA265_RS01460 0.83 +0.7 372,881 - +0.8 372,916 - +0.1 372,941 + +0.1 372,942 - -0.5 372,943 + +0.3 372,965 + -0.8 372,966 - +0.2 372,969 - +0.6 372,985 - +0.3 373,026 - +0.5 373,027 + +0.8 373,127 - -1.4 373,130 + -0.5 373,206 + CA265_RS01465 0.13 -0.3 373,224 + CA265_RS01465 0.21 +1.1 373,225 - CA265_RS01465 0.22 +0.5 373,225 - CA265_RS01465 0.22 +0.2 373,244 + CA265_RS01465 0.31 +0.5 373,246 + CA265_RS01465 0.32 -2.7 373,248 + CA265_RS01465 0.33 -0.1 373,248 + CA265_RS01465 0.33 -0.7 373,322 - CA265_RS01465 0.69 -0.1 373,322 - CA265_RS01465 0.69 -1.8 373,336 - CA265_RS01465 0.75 +0.3
Or see this region's nucleotide sequence