Strain Fitness in Shewanella loihica PV-4 around Shew_3780

Experiment: Polymyxin B sulfate 20 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 20 mg/ml
4,498,247	+		Shew_3778	0.47	+0.1
4,498,270	+		Shew_3778	0.50	+0.8
4,498,281	-		Shew_3778	0.51	+0.1
4,498,296	-		Shew_3778	0.53	+0.4
4,498,388	-		Shew_3778	0.64	-0.2
4,498,397	+		Shew_3778	0.65	-0.5
4,498,876	+		Shew_3779	0.45	-1.5
4,498,885	-		Shew_3779	0.48	-0.1
4,499,339	+				+0.9
4,499,432	+		Shew_3780	0.15	-0.2
4,499,854	+		Shew_3780	0.42	-2.4
4,499,928	-		Shew_3780	0.47	+0.8
4,499,933	+		Shew_3780	0.47	-0.1
4,500,064	+		Shew_3780	0.56	+0.4
4,500,157	+		Shew_3780	0.62	+0.5
4,500,303	+		Shew_3780	0.71	+0.1
4,500,330	-		Shew_3780	0.73	+0.4
4,500,346	-		Shew_3780	0.74	-0.1
4,500,569	-		Shew_3780	0.88	+0.2
4,500,694	-				+0.2
4,500,706	-				-0.2
4,500,867	+		Shew_3781	0.16	+0.6
4,500,895	+		Shew_3781	0.20	+0.1
4,500,895	+		Shew_3781	0.20	+1.0
4,500,895	+		Shew_3781	0.20	+1.1
4,500,895	+		Shew_3781	0.20	+0.1
4,500,895	+		Shew_3781	0.20	+0.9
4,500,895	+		Shew_3781	0.20	-0.5
4,500,903	-		Shew_3781	0.21	-0.1
4,500,903	-		Shew_3781	0.21	+0.9
4,501,069	+		Shew_3781	0.44	+1.3
4,501,069	+		Shew_3781	0.44	+0.4
4,501,077	-		Shew_3781	0.45	-1.3
4,501,077	-		Shew_3781	0.45	+1.2
4,501,077	-		Shew_3781	0.45	+0.8
4,501,275	-		Shew_3781	0.72	+0.2
4,501,415	+				+0.2
4,501,625	+		Shew_3782	0.13	+0.3
4,501,741	-		Shew_3782	0.23	+0.0