Strain Fitness in Shewanella loihica PV-4 around Shew_3411

Experiment: Polymyxin B sulfate 20 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 20 mg/ml
4,061,404	+		Shew_3410	0.38	+1.3
4,061,412	-		Shew_3410	0.38	+0.5
4,061,419	-		Shew_3410	0.39	+0.3
4,061,440	+		Shew_3410	0.40	+1.4
4,061,525	-		Shew_3410	0.46	+1.6
4,061,565	+		Shew_3410	0.49	+1.1
4,061,948	-		Shew_3410	0.76	-0.1
4,062,004	+		Shew_3410	0.80	-0.5
4,062,104	-		Shew_3410	0.87	+1.1
4,062,290	+				+1.3
4,062,344	-	zntR	Shew_3411	0.11	+0.2
4,062,370	-	zntR	Shew_3411	0.16	+1.3
4,062,499	-	zntR	Shew_3411	0.43	-0.7
4,062,509	-	zntR	Shew_3411	0.45	+1.4
4,062,596	-	zntR	Shew_3411	0.64	+2.1
4,062,655	-	zntR	Shew_3411	0.76	+1.9
4,062,655	-	zntR	Shew_3411	0.76	+1.4
4,062,655	-	zntR	Shew_3411	0.76	+1.4
4,062,832	+				+0.3
4,063,347	+	purH	Shew_3412	0.18	-0.1
4,063,558	+	purH	Shew_3412	0.31	+0.3
4,063,558	+	purH	Shew_3412	0.31	-3.7