Strain Fitness in Shewanella loihica PV-4 around Shew_3409

Experiment: Polymyxin B sulfate 20 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 20 mg/ml
4,058,885	-		Shew_3408	0.37	+0.5
4,058,977	+		Shew_3408	0.49	+0.1
4,058,990	-		Shew_3408	0.51	+1.3
4,059,156	+		Shew_3408	0.74	-1.1
4,059,228	+		Shew_3408	0.84	+0.5
4,059,324	-				+0.3
4,059,522	-				-0.3
4,059,522	-				+1.0
4,059,525	+				+0.7
4,059,875	+		Shew_3409	0.13	-0.4
4,059,883	-		Shew_3409	0.14	+0.2
4,059,971	-		Shew_3409	0.23	+0.5
4,059,980	+		Shew_3409	0.24	-0.5
4,060,070	-		Shew_3409	0.32	-0.6
4,060,086	+		Shew_3409	0.34	-0.2
4,060,267	-		Shew_3409	0.51	-0.1
4,060,602	+		Shew_3409	0.84	+0.3
4,060,770	+				-0.1
4,060,770	+				+0.1
4,060,770	+				-0.3
4,060,778	-				+0.7
4,061,003	-				+1.4
4,061,107	-		Shew_3410	0.17	+1.4
4,061,169	+		Shew_3410	0.21	+0.4
4,061,404	+		Shew_3410	0.38	+1.3
4,061,412	-		Shew_3410	0.38	+0.5
4,061,419	-		Shew_3410	0.39	+0.3
4,061,440	+		Shew_3410	0.40	+1.4
4,061,525	-		Shew_3410	0.46	+1.6
4,061,565	+		Shew_3410	0.49	+1.1