Strain Fitness in Shewanella loihica PV-4 around Shew_3249

Experiment: Polymyxin B sulfate 20 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 20 mg/ml
3,885,097	-				-0.3
3,885,176	-		Shew_3248	0.18	+0.0
3,885,329	-		Shew_3248	0.43	+0.4
3,885,432	-		Shew_3248	0.60	+0.4
3,885,432	-		Shew_3248	0.60	+0.3
3,885,547	-		Shew_3248	0.79	+0.7
3,885,587	-		Shew_3248	0.85	+0.2
3,885,602	-		Shew_3248	0.88	+0.4
3,885,824	+				-0.3
3,885,832	-				-0.4
3,885,838	+				-0.0
3,885,839	-				+0.1
3,885,846	-				+0.2
3,885,925	-				+0.5
3,885,938	-				+0.3
3,886,067	+				-0.4
3,886,075	-		Shew_3249	0.10	+0.2
3,886,250	+		Shew_3249	0.21	+0.4
3,886,258	-		Shew_3249	0.21	-1.3
3,886,269	-		Shew_3249	0.22	+0.8
3,886,315	+		Shew_3249	0.25	+0.2
3,886,339	+		Shew_3249	0.26	-1.5
3,886,740	-		Shew_3249	0.51	-0.8
3,886,960	-		Shew_3249	0.64	+0.1
3,887,105	+		Shew_3249	0.73	+0.1
3,887,201	-		Shew_3249	0.79	-0.2
3,887,380	+		Shew_3249	0.90	-1.5
3,887,567	-				+0.5
3,887,667	+				+0.2
3,887,677	+				+0.6
3,887,705	-		Shew_3250	0.12	+0.2
3,887,766	+		Shew_3250	0.17	-0.0
3,887,894	-		Shew_3250	0.28	-0.6
3,887,910	+		Shew_3250	0.29	+0.2
3,887,937	-		Shew_3250	0.31	+0.2
3,888,271	-		Shew_3250	0.58	+0.5
3,888,394	-		Shew_3250	0.68	+1.1
3,888,450	-		Shew_3250	0.73	+1.1