Strain Fitness in Shewanella loihica PV-4 around Shew_2668
Experiment: Polymyxin B sulfate 20 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Polymyxin B sulfate 20 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,155,535 | + | -2.3 | |||
3,155,651 | - | -3.0 | |||
3,155,660 | + | -2.6 | |||
3,155,660 | + | -3.7 | |||
3,155,784 | - | -2.1 | |||
3,156,029 | - | -1.5 | |||
3,156,089 | - | -2.5 | |||
3,156,089 | - | -2.2 | |||
3,156,355 | - | Shew_2668 | 0.13 | -2.1 | |
3,156,384 | - | Shew_2668 | 0.15 | -2.0 | |
3,156,575 | + | Shew_2668 | 0.26 | -1.2 | |
3,156,575 | + | Shew_2668 | 0.26 | -3.2 | |
3,156,673 | + | Shew_2668 | 0.32 | -2.1 | |
3,157,354 | + | Shew_2668 | 0.74 | -2.4 | |
3,157,844 | - | +0.0 | |||
3,158,462 | - | Shew_2669 | 0.24 | +0.4 |
Or see this region's nucleotide sequence