Strain Fitness in Shewanella loihica PV-4 around Shew_2430
Experiment: Polymyxin B sulfate 20 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Polymyxin B sulfate 20 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,854,742 | - | Shew_2428 | 0.66 | +0.6 | |
| 2,854,911 | - | Shew_2428 | 0.84 | -0.7 | |
| 2,855,116 | - | Shew_2429 | 0.12 | +0.7 | |
| 2,855,525 | - | -0.4 | |||
| 2,855,546 | - | -0.8 | |||
| 2,855,805 | + | Shew_2430 | 0.26 | -0.7 | |
| 2,856,167 | + | Shew_2430 | 0.61 | -0.2 | |
| 2,856,231 | - | Shew_2430 | 0.68 | -1.3 | |
| 2,856,231 | - | Shew_2430 | 0.68 | -1.1 | |
| 2,856,906 | - | Shew_2431 | 0.17 | -0.6 | |
| 2,856,944 | + | Shew_2431 | 0.19 | -0.4 | |
| 2,857,047 | - | Shew_2431 | 0.24 | -1.0 | |
| 2,857,114 | + | Shew_2431 | 0.27 | +0.4 |
Or see this region's nucleotide sequence