Strain Fitness in Shewanella loihica PV-4 around Shew_2209

Experiment: Polymyxin B sulfate 20 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 20 mg/ml
2,572,085	+				+0.2
2,572,130	+				+0.4
2,572,649	-				+1.1
2,573,043	+				-0.3
2,573,175	-				+0.8
2,573,289	+				+0.5
2,573,341	+		Shew_2209	0.10	+0.4
2,573,353	+		Shew_2209	0.11	-0.1
2,573,529	-		Shew_2209	0.16	-0.8
2,573,626	-		Shew_2209	0.19	+2.5
2,573,975	+		Shew_2209	0.29	+0.6
2,574,178	+		Shew_2209	0.35	+0.6
2,574,882	+		Shew_2209	0.55	+0.6
2,574,887	+		Shew_2209	0.55	-0.0
2,574,893	+		Shew_2209	0.55	+0.4
2,575,489	-		Shew_2209	0.72	-0.2
2,576,196	-				+0.9
2,576,246	+				+0.3
2,576,313	-				+0.0
2,576,691	+		Shew_2210	0.13	+0.2
2,576,699	-		Shew_2210	0.14	+0.9
2,577,203	+		Shew_2210	0.55	-1.9