Strain Fitness in Shewanella loihica PV-4 around Shew_1594
Experiment: Polymyxin B sulfate 20 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Polymyxin B sulfate 20 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,827,352 | + | -1.7 | |||
1,827,427 | + | +0.3 | |||
1,827,442 | + | +0.4 | |||
1,827,450 | - | -1.1 | |||
1,827,713 | - | Shew_1594 | 0.35 | -1.9 | |
1,828,044 | - | Shew_1594 | 0.69 | -1.1 | |
1,828,102 | - | Shew_1594 | 0.75 | -1.1 | |
1,828,306 | + | -1.2 | |||
1,828,551 | + | Shew_1595 | 0.31 | +0.2 | |
1,828,701 | - | Shew_1595 | 0.53 | -0.8 | |
1,828,775 | - | Shew_1595 | 0.65 | -0.6 | |
1,828,900 | - | Shew_1595 | 0.84 | +0.2 | |
1,828,910 | - | Shew_1595 | 0.85 | -1.2 | |
1,828,938 | + | Shew_1595 | 0.89 | +0.1 | |
1,829,250 | + | Shew_1596 | 0.19 | +0.6 | |
1,829,291 | + | Shew_1596 | 0.22 | +0.3 |
Or see this region's nucleotide sequence