Strain Fitness in Shewanella loihica PV-4 around Shew_1172

Experiment: Polymyxin B sulfate 20 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 20 mg/ml
1,353,677	+		Shew_1171	0.29	+0.2
1,354,126	-		Shew_1171	0.65	+0.2
1,354,320	-		Shew_1171	0.80	-0.1
1,354,340	-		Shew_1171	0.81	-0.8
1,354,355	-		Shew_1171	0.83	-1.3
1,354,391	+		Shew_1171	0.85	-0.4
1,354,501	-				-0.2
1,354,502	+				-0.7
1,354,761	-		Shew_1172	0.12	+0.2
1,354,952	+		Shew_1172	0.23	+0.3
1,355,040	-		Shew_1172	0.29	+1.4
1,355,143	-		Shew_1172	0.35	+1.2
1,355,165	+		Shew_1172	0.36	-0.1
1,355,273	+		Shew_1172	0.43	+0.5
1,355,291	+		Shew_1172	0.44	+1.3
1,355,485	+		Shew_1172	0.56	+2.4
1,355,509	-		Shew_1172	0.57	-0.3
1,355,570	-		Shew_1172	0.61	+1.0
1,355,788	+		Shew_1172	0.74	+0.6
1,355,841	+		Shew_1172	0.77	+1.1
1,355,889	+		Shew_1172	0.80	-1.0
1,355,972	+		Shew_1172	0.85	-0.3
1,355,972	+		Shew_1172	0.85	+0.5
1,356,187	+				-0.4
1,356,210	-				-1.1
1,356,211	+				-0.4
1,356,220	-				+1.4
1,356,278	-				+0.3
1,356,294	-				+0.2
1,356,600	+		Shew_1173	0.72	-0.4
1,356,608	-		Shew_1173	0.73	-0.2
1,356,629	+		Shew_1173	0.78	-0.1
1,356,756	+				-0.5
1,356,927	-				-2.8
1,357,096	+		Shew_1174	0.11	-0.1