Strain Fitness in Shewanella loihica PV-4 around Shew_1142

Experiment: Polymyxin B sulfate 20 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 20 mg/ml
1,317,312	+				-0.7
1,317,312	+				+0.2
1,317,312	+				+0.3
1,317,312	+				-0.5
1,317,312	+				+0.3
1,317,312	+				+1.5
1,317,312	+				-0.2
1,317,312	+				+1.0
1,317,320	-				+0.2
1,317,320	-				-0.2
1,317,400	-				-1.0
1,317,494	+				-1.1
1,317,542	+				-0.6
1,317,542	+				+0.4
1,317,619	-				+0.1
1,317,715	+				+0.3
1,317,723	-				+0.9
1,317,818	+		Shew_1142	0.14	-0.3
1,317,819	+		Shew_1142	0.14	-0.1
1,317,826	-		Shew_1142	0.14	+0.3
1,317,827	-		Shew_1142	0.14	-0.7
1,317,842	-		Shew_1142	0.15	+0.6
1,317,878	+		Shew_1142	0.18	+0.2
1,317,885	-		Shew_1142	0.18	-0.5
1,318,042	+		Shew_1142	0.30	+0.3
1,318,069	+		Shew_1142	0.32	-0.1
1,318,077	-		Shew_1142	0.32	+0.8
1,318,077	-		Shew_1142	0.32	-1.5
1,318,077	-		Shew_1142	0.32	-3.3
1,318,092	+		Shew_1142	0.33	-1.7
1,318,100	-		Shew_1142	0.34	+0.0
1,318,143	+		Shew_1142	0.37	+0.0
1,318,144	+		Shew_1142	0.37	-0.8
1,318,152	-		Shew_1142	0.38	-0.6
1,318,210	+		Shew_1142	0.42	-0.3
1,318,251	-		Shew_1142	0.45	-0.6
1,318,268	+		Shew_1142	0.46	+0.1
1,318,268	+		Shew_1142	0.46	+0.1
1,318,278	+		Shew_1142	0.47	+0.3
1,318,304	+		Shew_1142	0.49	+0.2
1,318,527	+		Shew_1142	0.65	+0.5
1,318,581	+		Shew_1142	0.68	-0.5
1,318,589	-		Shew_1142	0.69	-0.0
1,318,622	-		Shew_1142	0.71	+0.2
1,318,625	+		Shew_1142	0.72	-1.0
1,318,633	-		Shew_1142	0.72	+2.4
1,318,633	-		Shew_1142	0.72	-0.0
1,318,652	+		Shew_1142	0.74	-0.2
1,318,660	-		Shew_1142	0.74	-1.2
1,318,679	-		Shew_1142	0.76	+0.3
1,318,704	+		Shew_1142	0.77	+0.8
1,318,721	-		Shew_1142	0.79	+1.5
1,318,858	+		Shew_1142	0.88	+0.7
1,318,895	+				+0.1
1,318,903	-				+0.6
1,318,903	-				+1.5
1,318,989	+				-0.4
1,318,997	-				-0.1
1,319,006	+				+0.9
1,319,014	-				-0.1
1,319,044	+				+0.3
1,319,049	+				+0.9
1,319,052	-				-1.1
1,319,052	-				-0.0
1,319,052	-				+0.2
1,319,052	-				-0.1
1,319,117	-				+0.9
1,319,128	+				-1.9
1,319,128	+				+0.4
1,319,128	+				+0.7
1,319,179	+				+1.1
1,319,194	-				+0.1
1,319,194	-				-0.5
1,319,194	-				-0.1
1,319,194	-				-3.2
1,319,194	-				-0.5
1,319,245	+				+0.5
1,319,261	+				+0.2
1,319,261	+				-0.1
1,319,338	-				-0.8
1,319,356	+				-0.2
1,319,356	+				-0.2
1,319,420	+				+0.2
1,319,420	+				+2.5
1,319,428	-				+0.0
1,319,742	-				-0.5
1,319,742	-				+0.8
1,319,855	+				+0.5
1,319,858	-				+0.5