Experiment: Polymyxin B sulfate 20 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0668 and Shew_0669 are separated by 101 nucleotides Shew_0669 and Shew_0670 are separated by 116 nucleotides
Shew_0668: Shew_0668 - hypothetical protein (RefSeq), at 760,155 to 761,870
_0668
Shew_0669: Shew_0669 - redoxin domain-containing protein (RefSeq), at 761,972 to 762,502
_0669
Shew_0670: Shew_0670 - hypothetical protein (RefSeq), at 762,619 to 764,085
_0670
Position (kb) 761
762
763 Strain fitness (log2 ratio) -2
-1
0
1
2 at 761.025 kb on + strand, within Shew_0668 at 761.188 kb on + strand, within Shew_0668 at 761.370 kb on - strand, within Shew_0668 at 761.599 kb on + strand, within Shew_0668 at 761.606 kb on - strand, within Shew_0668 at 761.606 kb on - strand, within Shew_0668 at 761.806 kb on - strand at 761.853 kb on - strand at 761.858 kb on - strand at 762.071 kb on + strand, within Shew_0669 at 762.243 kb on + strand, within Shew_0669 at 762.438 kb on + strand, within Shew_0669 at 762.438 kb on + strand, within Shew_0669 at 762.438 kb on + strand, within Shew_0669 at 762.864 kb on + strand, within Shew_0670 at 762.872 kb on - strand, within Shew_0670 at 762.872 kb on - strand, within Shew_0670 at 762.886 kb on - strand, within Shew_0670 at 763.047 kb on + strand, within Shew_0670 at 763.055 kb on - strand, within Shew_0670 at 763.092 kb on + strand, within Shew_0670 at 763.111 kb on + strand, within Shew_0670 at 763.119 kb on - strand, within Shew_0670 at 763.140 kb on + strand, within Shew_0670 at 763.140 kb on + strand, within Shew_0670 at 763.148 kb on - strand, within Shew_0670 at 763.378 kb on + strand, within Shew_0670 at 763.396 kb on - strand, within Shew_0670 at 763.438 kb on + strand, within Shew_0670
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 20 mg/ml remove 761,025 + Shew_0668 0.51 -0.7 761,188 + Shew_0668 0.60 +0.8 761,370 - Shew_0668 0.71 -0.9 761,599 + Shew_0668 0.84 -0.0 761,606 - Shew_0668 0.85 +0.4 761,606 - Shew_0668 0.85 +1.8 761,806 - -0.2 761,853 - +0.7 761,858 - +1.0 762,071 + Shew_0669 0.19 -0.4 762,243 + Shew_0669 0.51 -0.5 762,438 + Shew_0669 0.88 +0.2 762,438 + Shew_0669 0.88 -0.2 762,438 + Shew_0669 0.88 -0.3 762,864 + Shew_0670 0.17 -0.2 762,872 - Shew_0670 0.17 +0.4 762,872 - Shew_0670 0.17 +0.7 762,886 - Shew_0670 0.18 -0.4 763,047 + Shew_0670 0.29 +0.2 763,055 - Shew_0670 0.30 +0.7 763,092 + Shew_0670 0.32 -0.1 763,111 + Shew_0670 0.34 +0.2 763,119 - Shew_0670 0.34 +0.4 763,140 + Shew_0670 0.36 +0.3 763,140 + Shew_0670 0.36 +0.1 763,148 - Shew_0670 0.36 +0.8 763,378 + Shew_0670 0.52 -0.3 763,396 - Shew_0670 0.53 -2.4 763,438 + Shew_0670 0.56 +0.7
Or see this region's nucleotide sequence