Strain Fitness in Shewanella loihica PV-4 around Shew_0281
Experiment: Polymyxin B sulfate 20 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Polymyxin B sulfate 20 mg/ml |
---|---|---|---|---|---|
remove | |||||
297,446 | + | -2.5 | |||
297,454 | - | +0.3 | |||
297,752 | - | Shew_0280 | 0.43 | +0.2 | |
297,875 | + | Shew_0280 | 0.61 | +0.8 | |
297,893 | - | Shew_0280 | 0.63 | +0.0 | |
298,049 | - | Shew_0280 | 0.85 | +1.0 | |
298,618 | - | Shew_0281 | 0.29 | -0.6 | |
298,697 | + | Shew_0281 | 0.37 | -2.2 | |
298,767 | + | Shew_0281 | 0.45 | -1.2 | |
298,777 | + | Shew_0281 | 0.46 | -1.6 | |
298,777 | + | Shew_0281 | 0.46 | +0.2 | |
298,855 | + | Shew_0281 | 0.54 | -1.1 | |
298,978 | - | Shew_0281 | 0.67 | -1.8 | |
299,205 | + | -1.2 | |||
299,260 | + | -1.4 | |||
299,312 | - | +0.9 | |||
299,604 | - | Shew_0282 | 0.33 | +1.3 | |
299,796 | + | Shew_0282 | 0.54 | -0.3 | |
299,825 | - | Shew_0282 | 0.58 | +1.2 | |
300,258 | + | +0.1 | |||
300,289 | - | -0.7 |
Or see this region's nucleotide sequence