Experiment: Polymyxin B sulfate 20 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0273 and Shew_0274 are separated by 167 nucleotides Shew_0274 and Shew_0275 are separated by 41 nucleotides Shew_0275 and Shew_0276 are separated by 5 nucleotides
Shew_0273: Shew_0273 - hypothetical protein (RefSeq), at 289,975 to 291,039
_0273
Shew_0274: Shew_0274 - hypothetical protein (RefSeq), at 291,207 to 292,340
_0274
Shew_0275: Shew_0275 - tetraheme cytochrome c, putative (RefSeq), at 292,382 to 292,750
_0275
Shew_0276: Shew_0276 - flavocytochrome c (RefSeq), at 292,756 to 294,273
_0276
Position (kb) 291
292
293 Strain fitness (log2 ratio) -2
-1
0
1
2 at 290.356 kb on - strand, within Shew_0273 at 290.399 kb on - strand, within Shew_0273 at 290.507 kb on + strand, within Shew_0273 at 290.551 kb on - strand, within Shew_0273 at 290.601 kb on + strand, within Shew_0273 at 290.668 kb on + strand, within Shew_0273 at 290.696 kb on - strand, within Shew_0273 at 290.710 kb on - strand, within Shew_0273 at 290.809 kb on - strand, within Shew_0273 at 290.847 kb on - strand, within Shew_0273 at 290.964 kb on + strand at 290.964 kb on + strand at 290.972 kb on - strand at 291.057 kb on + strand at 291.440 kb on + strand, within Shew_0274 at 291.511 kb on + strand, within Shew_0274 at 291.530 kb on + strand, within Shew_0274 at 291.633 kb on + strand, within Shew_0274 at 291.701 kb on - strand, within Shew_0274 at 291.748 kb on - strand, within Shew_0274 at 291.873 kb on + strand, within Shew_0274 at 291.873 kb on + strand, within Shew_0274 at 291.873 kb on + strand, within Shew_0274 at 291.881 kb on - strand, within Shew_0274 at 291.881 kb on - strand, within Shew_0274 at 292.429 kb on - strand, within Shew_0275 at 292.711 kb on + strand, within Shew_0275 at 292.762 kb on - strand at 292.762 kb on - strand at 292.877 kb on + strand at 292.973 kb on - strand, within Shew_0276 at 292.973 kb on - strand, within Shew_0276 at 293.222 kb on + strand, within Shew_0276 at 293.276 kb on + strand, within Shew_0276
Per-strain Table
Position Strand Gene LocusTag Fraction Polymyxin B sulfate 20 mg/ml remove 290,356 - Shew_0273 0.36 +0.4 290,399 - Shew_0273 0.40 +0.3 290,507 + Shew_0273 0.50 +0.8 290,551 - Shew_0273 0.54 +0.4 290,601 + Shew_0273 0.59 +0.8 290,668 + Shew_0273 0.65 -0.6 290,696 - Shew_0273 0.68 +0.2 290,710 - Shew_0273 0.69 +0.4 290,809 - Shew_0273 0.78 +0.1 290,847 - Shew_0273 0.82 -2.3 290,964 + +0.1 290,964 + +0.5 290,972 - -0.4 291,057 + +0.8 291,440 + Shew_0274 0.21 +2.0 291,511 + Shew_0274 0.27 +0.2 291,530 + Shew_0274 0.28 +0.9 291,633 + Shew_0274 0.38 +0.4 291,701 - Shew_0274 0.44 +1.6 291,748 - Shew_0274 0.48 +1.0 291,873 + Shew_0274 0.59 +1.9 291,873 + Shew_0274 0.59 +0.4 291,873 + Shew_0274 0.59 +0.7 291,881 - Shew_0274 0.59 +1.1 291,881 - Shew_0274 0.59 +0.1 292,429 - Shew_0275 0.13 +0.2 292,711 + Shew_0275 0.89 -0.1 292,762 - +0.9 292,762 - -0.2 292,877 + +1.2 292,973 - Shew_0276 0.14 +0.4 292,973 - Shew_0276 0.14 -0.3 293,222 + Shew_0276 0.31 +0.1 293,276 + Shew_0276 0.34 +1.0
Or see this region's nucleotide sequence