Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS05780

Experiment: D-Maltose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Maltose (C)
1,405,453	+		CA265_RS05770	0.88	-0.1
1,405,575	+				-0.4
1,405,575	+				-0.6
1,405,576	-				-0.5
1,405,630	-				+0.3
1,405,632	+				-0.0
1,405,641	+				-0.3
1,405,641	+				-3.8
1,405,654	-				-1.0
1,405,679	-				+0.1
1,405,684	+				+0.3
1,405,733	+		CA265_RS05775	0.18	-0.6
1,405,734	-		CA265_RS05775	0.18	+0.6
1,405,734	-		CA265_RS05775	0.18	+0.4
1,405,734	-		CA265_RS05775	0.18	-1.3
1,405,734	-		CA265_RS05775	0.18	+0.0
1,405,749	-		CA265_RS05775	0.21	+0.1
1,405,749	-		CA265_RS05775	0.21	-0.9
1,405,823	-		CA265_RS05775	0.38	+0.7
1,405,827	-		CA265_RS05775	0.39	+0.2
1,405,834	+		CA265_RS05775	0.41	+0.7
1,405,849	+		CA265_RS05775	0.44	-0.5
1,405,894	+		CA265_RS05775	0.54	+0.4
1,405,995	-		CA265_RS05775	0.77	+0.7
1,405,999	-		CA265_RS05775	0.78	-0.1
1,406,018	+		CA265_RS05775	0.82	-1.4
1,406,025	-		CA265_RS05775	0.84	-1.1
1,406,067	-				+0.5
1,406,071	-				-1.4
1,406,149	+				+0.2
1,406,149	+				+0.1
1,406,151	+				+0.9
1,406,185	+				-0.1
1,406,185	+				-0.0
1,406,185	+				-0.2
1,406,185	+				+0.8
1,406,190	+				-1.2
1,406,190	+				-0.5
1,406,263	-				+0.4
1,406,344	-				-0.3
1,406,368	-				-0.7
1,406,370	-				+0.4
1,406,377	+				+0.3
1,406,378	-				+0.2
1,406,593	+				+0.0
1,406,602	-				+0.2
1,406,631	+				-0.7
1,406,686	+				-1.2
1,406,776	+				-0.7
1,406,777	-				-1.1
1,406,784	+				+0.8
1,406,868	+		CA265_RS05780	0.12	-0.4
1,406,946	-		CA265_RS05780	0.14	-0.7
1,407,057	-		CA265_RS05780	0.17	+0.8
1,407,060	-		CA265_RS05780	0.17	-0.3
1,407,077	+		CA265_RS05780	0.18	+0.2
1,407,190	+		CA265_RS05780	0.20	-0.3
1,407,210	+		CA265_RS05780	0.21	-0.1
1,407,282	+		CA265_RS05780	0.23	+0.5
1,407,283	-		CA265_RS05780	0.23	+0.6
1,407,290	+		CA265_RS05780	0.23	-0.5
1,407,290	+		CA265_RS05780	0.23	-0.1
1,407,291	-		CA265_RS05780	0.23	-0.0
1,407,351	-		CA265_RS05780	0.25	-0.2
1,407,382	-		CA265_RS05780	0.25	+0.2
1,407,414	-		CA265_RS05780	0.26	+0.8
1,407,460	+		CA265_RS05780	0.27	-0.5
1,407,460	+		CA265_RS05780	0.27	-0.1
1,407,461	-		CA265_RS05780	0.27	+0.1
1,407,563	+		CA265_RS05780	0.30	-0.1
1,407,564	-		CA265_RS05780	0.30	-0.1
1,407,656	-		CA265_RS05780	0.32	+0.2
1,407,658	+		CA265_RS05780	0.32	+0.6
1,407,744	+		CA265_RS05780	0.35	-0.2
1,407,745	-		CA265_RS05780	0.35	-0.2
1,407,754	-		CA265_RS05780	0.35	+0.2
1,407,763	+		CA265_RS05780	0.35	-2.1
1,407,764	-		CA265_RS05780	0.35	-0.0
1,407,770	+		CA265_RS05780	0.35	-1.6
1,407,771	-		CA265_RS05780	0.35	+0.5
1,407,771	-		CA265_RS05780	0.35	+0.6
1,407,771	-		CA265_RS05780	0.35	+0.2
1,407,771	-		CA265_RS05780	0.35	-0.1
1,407,773	+		CA265_RS05780	0.35	-0.4
1,407,773	+		CA265_RS05780	0.35	+0.8
1,407,781	+		CA265_RS05780	0.36	+0.6
1,407,781	+		CA265_RS05780	0.36	-0.3
1,407,781	+		CA265_RS05780	0.36	-0.3
1,407,782	-		CA265_RS05780	0.36	-1.3
1,407,807	+		CA265_RS05780	0.36	-0.7
1,407,807	+		CA265_RS05780	0.36	-0.1
1,407,824	-		CA265_RS05780	0.37	+0.5
1,407,878	+		CA265_RS05780	0.38	-0.2
1,407,879	-		CA265_RS05780	0.38	+0.0
1,407,881	-		CA265_RS05780	0.38	+0.1
1,407,898	+		CA265_RS05780	0.39	+1.8
1,407,906	+		CA265_RS05780	0.39	-0.1
1,407,937	+		CA265_RS05780	0.40	-0.1
1,408,026	+		CA265_RS05780	0.42	-0.4
1,408,136	-		CA265_RS05780	0.45	-0.4
1,408,136	-		CA265_RS05780	0.45	-0.8
1,408,139	+		CA265_RS05780	0.45	-0.1
1,408,139	+		CA265_RS05780	0.45	+0.3
1,408,140	-		CA265_RS05780	0.45	-0.0
1,408,212	-		CA265_RS05780	0.47	+0.4
1,408,213	+		CA265_RS05780	0.47	+0.4
1,408,235	+		CA265_RS05780	0.47	-1.2
1,408,236	-		CA265_RS05780	0.47	-0.1
1,408,241	+		CA265_RS05780	0.47	-0.4
1,408,242	-		CA265_RS05780	0.47	+0.5
1,408,242	-		CA265_RS05780	0.47	-0.2
1,408,245	+		CA265_RS05780	0.48	+0.3
1,408,245	+		CA265_RS05780	0.48	+0.3
1,408,245	+		CA265_RS05780	0.48	-0.3
1,408,246	-		CA265_RS05780	0.48	-0.5
1,408,264	-		CA265_RS05780	0.48	-0.6
1,408,277	+		CA265_RS05780	0.48	+0.6
1,408,324	+		CA265_RS05780	0.50	+0.4
1,408,374	-		CA265_RS05780	0.51	+0.4
1,408,448	-		CA265_RS05780	0.53	+0.7
1,408,450	+		CA265_RS05780	0.53	-0.6
1,408,451	-		CA265_RS05780	0.53	+0.1
1,408,474	+		CA265_RS05780	0.53	+0.3
1,408,475	-		CA265_RS05780	0.53	-0.1
1,408,475	-		CA265_RS05780	0.53	-0.8
1,408,508	+		CA265_RS05780	0.54	-0.1
1,408,508	+		CA265_RS05780	0.54	+0.1
1,408,509	-		CA265_RS05780	0.54	+1.0
1,408,517	+		CA265_RS05780	0.55	+0.9
1,408,517	+		CA265_RS05780	0.55	-0.5
1,408,575	-		CA265_RS05780	0.56	+0.6
1,408,577	-		CA265_RS05780	0.56	-0.0
1,408,597	+		CA265_RS05780	0.57	-0.6
1,408,597	+		CA265_RS05780	0.57	+1.0
1,408,598	-		CA265_RS05780	0.57	+1.6
1,408,630	+		CA265_RS05780	0.57	-0.1
1,408,829	-		CA265_RS05780	0.63	+0.1
1,408,829	-		CA265_RS05780	0.63	-0.6
1,408,853	-		CA265_RS05780	0.63	+0.1
1,408,910	-		CA265_RS05780	0.65	-0.4
1,408,952	-		CA265_RS05780	0.66	+0.4
1,408,955	-		CA265_RS05780	0.66	-0.0
1,408,966	+		CA265_RS05780	0.66	-0.0
1,408,967	-		CA265_RS05780	0.66	-0.1
1,409,024	-		CA265_RS05780	0.68	-0.6
1,409,034	+		CA265_RS05780	0.68	-1.0
1,409,034	+		CA265_RS05780	0.68	-0.8
1,409,122	+		CA265_RS05780	0.70	-0.8
1,409,122	+		CA265_RS05780	0.70	-0.0
1,409,187	-		CA265_RS05780	0.72	+0.3
1,409,199	+		CA265_RS05780	0.72	+0.7
1,409,200	-		CA265_RS05780	0.72	-0.3
1,409,336	-		CA265_RS05780	0.76	+1.2
1,409,362	+		CA265_RS05780	0.76	-0.2
1,409,450	+		CA265_RS05780	0.78	-0.5
1,409,570	-		CA265_RS05780	0.82	-1.5
1,409,634	+		CA265_RS05780	0.83	-1.0
1,409,708	-		CA265_RS05780	0.85	-0.1
1,409,710	+		CA265_RS05780	0.85	-0.2
1,409,710	+		CA265_RS05780	0.85	-1.0
1,409,711	-		CA265_RS05780	0.85	-0.8
1,409,750	+		CA265_RS05780	0.86	-1.6
1,409,750	+		CA265_RS05780	0.86	-1.4
1,409,760	-		CA265_RS05780	0.86	-1.5
1,409,760	-		CA265_RS05780	0.86	+1.9
1,409,945	+				+0.7
1,409,946	-				+0.4
1,410,026	+				-0.4
1,410,132	-				+0.1
1,410,145	-				+1.6
1,410,232	+				-0.9
1,410,233	-				+1.2
1,410,259	+				-1.5
1,410,293	-				-0.5
1,410,300	+				-1.3
1,410,312	+				-0.3
1,410,313	-				+0.8
1,410,428	+				+0.3
1,410,434	+				+0.8
1,410,434	+				-0.6
1,410,435	-				+1.1
1,410,468	-				-0.1
1,410,471	+				-0.2
1,410,500	+				-0.0
1,410,564	+				+0.2
1,410,599	+				-0.3
1,410,613	+				+0.6
1,410,613	+				-0.5
1,410,614	-				-0.4
1,410,614	-				+0.0
1,410,614	-				-0.7
1,410,628	+				+0.1
1,410,634	-				+0.1
1,410,636	-				-1.4
1,410,636	-				+0.8
1,410,693	+				+0.5
1,410,723	+				+0.2
1,410,751	+				+0.8
1,410,789	+				-0.4
1,410,790	-				+0.3
1,410,790	-				-0.1
1,410,795	+				+0.1
1,410,810	-				+1.6
1,410,841	-				+0.2
1,410,923	+		CA265_RS05785	0.10	+0.2
1,410,923	+		CA265_RS05785	0.10	-0.4
1,410,923	+		CA265_RS05785	0.10	-0.9
1,410,924	-		CA265_RS05785	0.10	+1.1
1,410,934	-		CA265_RS05785	0.10	-0.2
1,410,934	-		CA265_RS05785	0.10	-0.5
1,410,938	+		CA265_RS05785	0.10	-0.4
1,410,939	-		CA265_RS05785	0.11	+0.3
1,410,997	-		CA265_RS05785	0.12	+1.1
1,411,047	+		CA265_RS05785	0.13	+0.5
1,411,066	-		CA265_RS05785	0.14	+0.1
1,411,112	+		CA265_RS05785	0.15	+0.0
1,411,112	+		CA265_RS05785	0.15	+0.1
1,411,113	-		CA265_RS05785	0.15	+0.2
1,411,153	-		CA265_RS05785	0.16	-0.3
1,411,248	+		CA265_RS05785	0.18	-0.1
1,411,248	+		CA265_RS05785	0.18	-1.4
1,411,249	-		CA265_RS05785	0.18	-0.3