Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS05300

Experiment: D-Maltose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Maltose (C)
1,269,496	+				+0.0
1,269,552	+				-0.1
1,269,573	-				+0.2
1,269,647	-		CA265_RS05295	0.17	-0.0
1,269,647	-				+2.6
1,269,745	-		CA265_RS05295	0.29	-0.1
1,269,753	+		CA265_RS05295	0.30	+0.1
1,269,754	-		CA265_RS05295	0.30	+0.3
1,269,757	+		CA265_RS05295	0.30	+1.8
1,269,758	-		CA265_RS05295	0.30	-0.3
1,269,759	+		CA265_RS05295	0.31	-0.6
1,269,760	-		CA265_RS05295	0.31	-0.4
1,269,778	+		CA265_RS05295	0.33	+0.3
1,269,819	+		CA265_RS05295	0.38	-0.3
1,269,820	-		CA265_RS05295	0.38	+0.3
1,269,858	-		CA265_RS05295	0.43	-0.3
1,269,861	+		CA265_RS05295	0.43	+0.2
1,269,888	-		CA265_RS05295	0.47	-0.4
1,269,897	+		CA265_RS05295	0.48	+0.2
1,269,954	+		CA265_RS05295	0.55	-0.4
1,270,031	+		CA265_RS05295	0.64	-0.4
1,270,033	+		CA265_RS05295	0.64	-0.3
1,270,057	-		CA265_RS05295	0.67	+0.6
1,270,081	-		CA265_RS05295	0.70	-0.7
1,270,121	+		CA265_RS05295	0.75	+0.0
1,270,144	+		CA265_RS05295	0.78	+0.2
1,270,187	-		CA265_RS05295	0.83	+1.3
1,270,243	-				-0.4
1,270,261	+				-1.2
1,270,279	-				-0.8
1,270,329	-				-0.3
1,270,341	-				-0.1
1,270,343	-				+0.5
1,270,343	-				+1.9
1,270,343	-				-1.3
1,270,345	-				-0.6
1,270,345	-				+0.1
1,270,352	-				+0.2
1,270,367	-				-0.5
1,270,378	-				-0.5
1,270,412	-				+0.2
1,270,416	-				+0.5
1,270,422	-				-0.2
1,270,422	-				-1.2
1,270,515	-				-0.2
1,270,727	+		CA265_RS05300	0.13	+0.6
1,270,727	+		CA265_RS05300	0.13	+0.1
1,270,758	-		CA265_RS05300	0.15	+0.4
1,270,758	-		CA265_RS05300	0.15	+0.2
1,270,790	+		CA265_RS05300	0.16	+0.1
1,270,844	-		CA265_RS05300	0.19	-0.5
1,270,872	+		CA265_RS05300	0.20	+0.8
1,270,873	-		CA265_RS05300	0.20	+1.1
1,270,914	+		CA265_RS05300	0.22	-0.6
1,271,010	-		CA265_RS05300	0.26	+0.7
1,271,035	+		CA265_RS05300	0.28	-1.0
1,271,168	+		CA265_RS05300	0.34	+0.2
1,271,168	+		CA265_RS05300	0.34	+0.2
1,271,184	+		CA265_RS05300	0.35	-0.7
1,271,184	+		CA265_RS05300	0.35	-0.2
1,271,185	-		CA265_RS05300	0.35	-1.2
1,271,210	+		CA265_RS05300	0.36	-0.2
1,271,244	+		CA265_RS05300	0.37	+0.4
1,271,245	-		CA265_RS05300	0.37	+0.8
1,271,357	-		CA265_RS05300	0.43	+0.6
1,271,399	+		CA265_RS05300	0.45	-0.3
1,271,507	+		CA265_RS05300	0.50	-0.3
1,271,548	+		CA265_RS05300	0.51	-0.3
1,271,644	-		CA265_RS05300	0.56	-0.3
1,271,644	-		CA265_RS05300	0.56	+0.4
1,271,671	+		CA265_RS05300	0.57	-0.2
1,271,720	+		CA265_RS05300	0.59	+0.5
1,271,720	+		CA265_RS05300	0.59	-0.7
1,271,766	+		CA265_RS05300	0.62	+0.0
1,271,869	-		CA265_RS05300	0.66	-0.7
1,271,874	+		CA265_RS05300	0.67	+1.4
1,271,914	+		CA265_RS05300	0.68	-1.8
1,271,914	+		CA265_RS05300	0.68	+0.3
1,271,924	+		CA265_RS05300	0.69	+0.2
1,271,974	+		CA265_RS05300	0.71	+0.0
1,271,998	+		CA265_RS05300	0.72	+0.6
1,272,013	-		CA265_RS05300	0.73	-0.3
1,272,015	-		CA265_RS05300	0.73	+1.6
1,272,025	-		CA265_RS05300	0.74	-0.3
1,272,025	-		CA265_RS05300	0.74	-0.7
1,272,143	-		CA265_RS05300	0.79	+0.4
1,272,158	-		CA265_RS05300	0.80	-0.5
1,272,181	-		CA265_RS05300	0.81	+0.1
1,272,235	+		CA265_RS05300	0.83	-0.3
1,272,238	-		CA265_RS05300	0.84	+0.6
1,272,304	+		CA265_RS05300	0.87	+1.0
1,272,304	+		CA265_RS05300	0.87	+0.2
1,272,375	-		CA265_RS05300	0.90	-1.0
1,272,483	+				-0.1
1,272,488	+				-0.5
1,272,513	-				-0.3
1,272,513	-				+0.3
1,272,522	+				+0.1
1,272,522	+				-1.6
1,272,522	+				-0.0
1,272,522	+				-0.1
1,272,523	-				-1.7
1,272,577	+				+0.2
1,272,580	-				+1.1
1,272,590	-				+1.0
1,272,592	+				+0.4
1,272,710	-				-0.3
1,272,710	-				-0.3
1,272,714	+				-0.4
1,272,715	-				-0.3
1,272,715	-				+0.4
1,272,767	+				-0.4
1,272,767	+				+0.1
1,272,894	+		CA265_RS05305	0.17	-0.3
1,272,941	+		CA265_RS05305	0.21	-1.2
1,272,942	-		CA265_RS05305	0.21	+0.1
1,272,944	+		CA265_RS05305	0.21	-0.1
1,272,950	-		CA265_RS05305	0.21	-0.1
1,272,950	-		CA265_RS05305	0.21	+0.5
1,272,961	+		CA265_RS05305	0.22	+0.5
1,272,964	+		CA265_RS05305	0.23	+1.4
1,272,965	-		CA265_RS05305	0.23	-1.3
1,273,011	+		CA265_RS05305	0.27	-0.2
1,273,029	+		CA265_RS05305	0.28	+1.6
1,273,035	+		CA265_RS05305	0.29	-0.0
1,273,036	-		CA265_RS05305	0.29	+1.4
1,273,068	+		CA265_RS05305	0.31	+0.1
1,273,068	+		CA265_RS05305	0.31	-0.0
1,273,156	-		CA265_RS05305	0.39	+0.1
1,273,222	-		CA265_RS05305	0.44	+1.6
1,273,291	-		CA265_RS05305	0.50	+1.5
1,273,301	+		CA265_RS05305	0.51	+0.1
1,273,302	-		CA265_RS05305	0.51	-0.1
1,273,315	-		CA265_RS05305	0.52	-0.4
1,273,318	-		CA265_RS05305	0.52	-0.0
1,273,347	+				-0.4
1,273,354	+		CA265_RS05305	0.55	-0.5
1,273,355	-		CA265_RS05305	0.55	+0.5
1,273,370	-		CA265_RS05305	0.57	-0.5
1,273,423	-		CA265_RS05305	0.61	-1.0
1,273,423	-		CA265_RS05305	0.61	-0.3
1,273,423	-		CA265_RS05305	0.61	+0.0
1,273,462	+		CA265_RS05305	0.64	-0.2
1,273,463	-		CA265_RS05305	0.64	+1.0
1,273,470	+		CA265_RS05305	0.65	-0.5
1,273,476	-		CA265_RS05305	0.65	+0.3
1,273,524	+		CA265_RS05305	0.70	-0.1