Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS17550 and ABZR87_RS17555 are separated by 2 nucleotides ABZR87_RS17555 and ABZR87_RS17560 are separated by 150 nucleotides
ABZR87_RS17550: ABZR87_RS17550 - MFS transporter, at 299,240 to 300,565
_RS17550
ABZR87_RS17555: ABZR87_RS17555 - amidohydrolase family protein, at 300,568 to 301,500
_RS17555
ABZR87_RS17560: ABZR87_RS17560 - ABC transporter substrate-binding protein, at 301,651 to 302,859
_RS17560
Position (kb) 300
301
302 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 299.582 kb on + strand, within ABZR87_RS17550 at 299.582 kb on + strand, within ABZR87_RS17550 at 299.583 kb on - strand, within ABZR87_RS17550 at 299.583 kb on - strand, within ABZR87_RS17550 at 299.642 kb on + strand, within ABZR87_RS17550 at 299.643 kb on - strand, within ABZR87_RS17550 at 299.722 kb on + strand, within ABZR87_RS17550 at 299.911 kb on + strand, within ABZR87_RS17550 at 299.911 kb on + strand, within ABZR87_RS17550 at 299.911 kb on + strand, within ABZR87_RS17550 at 299.912 kb on - strand, within ABZR87_RS17550 at 299.912 kb on - strand, within ABZR87_RS17550 at 299.912 kb on - strand, within ABZR87_RS17550 at 299.984 kb on + strand, within ABZR87_RS17550 at 299.985 kb on - strand, within ABZR87_RS17550 at 299.985 kb on - strand, within ABZR87_RS17550 at 300.006 kb on + strand, within ABZR87_RS17550 at 300.007 kb on - strand, within ABZR87_RS17550 at 300.007 kb on - strand, within ABZR87_RS17550 at 300.064 kb on + strand, within ABZR87_RS17550 at 300.064 kb on + strand, within ABZR87_RS17550 at 300.065 kb on - strand, within ABZR87_RS17550 at 300.116 kb on + strand, within ABZR87_RS17550 at 300.293 kb on + strand, within ABZR87_RS17550 at 300.293 kb on + strand, within ABZR87_RS17550 at 300.293 kb on + strand, within ABZR87_RS17550 at 300.294 kb on - strand, within ABZR87_RS17550 at 300.294 kb on - strand, within ABZR87_RS17550 at 300.420 kb on - strand, within ABZR87_RS17550 at 300.420 kb on - strand, within ABZR87_RS17550 at 300.420 kb on - strand, within ABZR87_RS17550 at 300.420 kb on - strand, within ABZR87_RS17550 at 300.449 kb on + strand at 300.449 kb on + strand at 300.449 kb on + strand at 300.450 kb on - strand at 300.450 kb on - strand at 300.450 kb on - strand at 300.630 kb on + strand at 300.631 kb on - strand at 300.643 kb on - strand at 300.643 kb on - strand at 300.730 kb on + strand, within ABZR87_RS17555 at 300.730 kb on + strand, within ABZR87_RS17555 at 300.730 kb on + strand, within ABZR87_RS17555 at 300.731 kb on - strand, within ABZR87_RS17555 at 300.731 kb on - strand, within ABZR87_RS17555 at 300.731 kb on - strand, within ABZR87_RS17555 at 300.796 kb on + strand, within ABZR87_RS17555 at 300.797 kb on - strand, within ABZR87_RS17555 at 300.797 kb on - strand, within ABZR87_RS17555 at 300.856 kb on + strand, within ABZR87_RS17555 at 300.933 kb on + strand, within ABZR87_RS17555 at 300.934 kb on - strand, within ABZR87_RS17555 at 301.088 kb on + strand, within ABZR87_RS17555 at 301.089 kb on - strand, within ABZR87_RS17555 at 301.089 kb on - strand, within ABZR87_RS17555 at 301.089 kb on - strand, within ABZR87_RS17555 at 301.089 kb on - strand, within ABZR87_RS17555 at 301.261 kb on + strand, within ABZR87_RS17555 at 301.262 kb on - strand, within ABZR87_RS17555 at 301.262 kb on - strand, within ABZR87_RS17555 at 301.262 kb on - strand, within ABZR87_RS17555 at 301.262 kb on - strand, within ABZR87_RS17555 at 301.292 kb on - strand, within ABZR87_RS17555 at 301.292 kb on - strand, within ABZR87_RS17555 at 301.292 kb on - strand, within ABZR87_RS17555 at 301.389 kb on + strand, within ABZR87_RS17555 at 301.389 kb on + strand, within ABZR87_RS17555 at 301.390 kb on - strand, within ABZR87_RS17555 at 301.390 kb on - strand, within ABZR87_RS17555 at 301.390 kb on - strand, within ABZR87_RS17555 at 301.390 kb on - strand, within ABZR87_RS17555 at 301.390 kb on - strand, within ABZR87_RS17555 at 301.486 kb on + strand at 301.487 kb on - strand at 301.768 kb on + strand at 301.768 kb on + strand at 301.768 kb on + strand at 301.769 kb on - strand at 302.011 kb on + strand, within ABZR87_RS17560 at 302.011 kb on + strand, within ABZR87_RS17560 at 302.011 kb on + strand, within ABZR87_RS17560 at 302.012 kb on - strand, within ABZR87_RS17560 at 302.084 kb on - strand, within ABZR87_RS17560 at 302.084 kb on - strand, within ABZR87_RS17560 at 302.112 kb on + strand, within ABZR87_RS17560 at 302.149 kb on + strand, within ABZR87_RS17560 at 302.149 kb on + strand, within ABZR87_RS17560 at 302.150 kb on - strand, within ABZR87_RS17560 at 302.150 kb on - strand, within ABZR87_RS17560 at 302.167 kb on + strand, within ABZR87_RS17560 at 302.167 kb on + strand, within ABZR87_RS17560 at 302.167 kb on + strand, within ABZR87_RS17560 at 302.167 kb on + strand, within ABZR87_RS17560 at 302.168 kb on - strand, within ABZR87_RS17560 at 302.278 kb on + strand, within ABZR87_RS17560 at 302.279 kb on - strand, within ABZR87_RS17560
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 299,582 + ABZR87_RS17550 0.26 +0.7 299,582 + ABZR87_RS17550 0.26 +1.5 299,583 - ABZR87_RS17550 0.26 -1.4 299,583 - ABZR87_RS17550 0.26 +1.5 299,642 + ABZR87_RS17550 0.30 +0.5 299,643 - ABZR87_RS17550 0.30 +1.4 299,722 + ABZR87_RS17550 0.36 +1.5 299,911 + ABZR87_RS17550 0.51 -0.8 299,911 + ABZR87_RS17550 0.51 -0.8 299,911 + ABZR87_RS17550 0.51 -2.5 299,912 - ABZR87_RS17550 0.51 -0.1 299,912 - ABZR87_RS17550 0.51 +0.8 299,912 - ABZR87_RS17550 0.51 +0.1 299,984 + ABZR87_RS17550 0.56 -1.7 299,985 - ABZR87_RS17550 0.56 +0.1 299,985 - ABZR87_RS17550 0.56 -2.2 300,006 + ABZR87_RS17550 0.58 -2.6 300,007 - ABZR87_RS17550 0.58 -1.3 300,007 - ABZR87_RS17550 0.58 +1.2 300,064 + ABZR87_RS17550 0.62 -0.4 300,064 + ABZR87_RS17550 0.62 +0.9 300,065 - ABZR87_RS17550 0.62 +3.6 300,116 + ABZR87_RS17550 0.66 -1.0 300,293 + ABZR87_RS17550 0.79 +0.6 300,293 + ABZR87_RS17550 0.79 -2.0 300,293 + ABZR87_RS17550 0.79 +2.5 300,294 - ABZR87_RS17550 0.79 -2.3 300,294 - ABZR87_RS17550 0.79 -1.9 300,420 - ABZR87_RS17550 0.89 -0.4 300,420 - ABZR87_RS17550 0.89 -3.5 300,420 - ABZR87_RS17550 0.89 +0.4 300,420 - ABZR87_RS17550 0.89 +1.5 300,449 + -2.3 300,449 + -0.7 300,449 + +0.3 300,450 - -0.3 300,450 - +0.8 300,450 - -1.4 300,630 + +0.8 300,631 - +0.1 300,643 - -0.7 300,643 - -0.0 300,730 + ABZR87_RS17555 0.17 +1.1 300,730 + ABZR87_RS17555 0.17 -1.7 300,730 + ABZR87_RS17555 0.17 -0.6 300,731 - ABZR87_RS17555 0.17 -1.3 300,731 - ABZR87_RS17555 0.17 +2.1 300,731 - ABZR87_RS17555 0.17 +1.6 300,796 + ABZR87_RS17555 0.24 +2.3 300,797 - ABZR87_RS17555 0.25 -2.8 300,797 - ABZR87_RS17555 0.25 -1.9 300,856 + ABZR87_RS17555 0.31 +1.4 300,933 + ABZR87_RS17555 0.39 -0.6 300,934 - ABZR87_RS17555 0.39 -0.8 301,088 + ABZR87_RS17555 0.56 +2.0 301,089 - ABZR87_RS17555 0.56 +0.3 301,089 - ABZR87_RS17555 0.56 -0.4 301,089 - ABZR87_RS17555 0.56 -0.7 301,089 - ABZR87_RS17555 0.56 +2.2 301,261 + ABZR87_RS17555 0.74 +0.7 301,262 - ABZR87_RS17555 0.74 -1.0 301,262 - ABZR87_RS17555 0.74 -2.8 301,262 - ABZR87_RS17555 0.74 -1.4 301,262 - ABZR87_RS17555 0.74 -1.1 301,292 - ABZR87_RS17555 0.78 -1.4 301,292 - ABZR87_RS17555 0.78 +0.9 301,292 - ABZR87_RS17555 0.78 -0.5 301,389 + ABZR87_RS17555 0.88 +1.2 301,389 + ABZR87_RS17555 0.88 +1.5 301,390 - ABZR87_RS17555 0.88 +0.4 301,390 - ABZR87_RS17555 0.88 -1.6 301,390 - ABZR87_RS17555 0.88 -1.3 301,390 - ABZR87_RS17555 0.88 -3.6 301,390 - ABZR87_RS17555 0.88 -2.2 301,486 + +0.4 301,487 - -0.3 301,768 + +1.6 301,768 + +1.2 301,768 + -1.7 301,769 - -0.1 302,011 + ABZR87_RS17560 0.30 +0.7 302,011 + ABZR87_RS17560 0.30 +0.8 302,011 + ABZR87_RS17560 0.30 -1.3 302,012 - ABZR87_RS17560 0.30 -0.1 302,084 - ABZR87_RS17560 0.36 -1.1 302,084 - ABZR87_RS17560 0.36 -0.9 302,112 + ABZR87_RS17560 0.38 +0.1 302,149 + ABZR87_RS17560 0.41 +0.5 302,149 + ABZR87_RS17560 0.41 -3.2 302,150 - ABZR87_RS17560 0.41 +0.9 302,150 - ABZR87_RS17560 0.41 -3.8 302,167 + ABZR87_RS17560 0.43 -4.0 302,167 + ABZR87_RS17560 0.43 -0.3 302,167 + ABZR87_RS17560 0.43 +1.2 302,167 + ABZR87_RS17560 0.43 +1.6 302,168 - ABZR87_RS17560 0.43 +0.3 302,278 + ABZR87_RS17560 0.52 +0.3 302,279 - ABZR87_RS17560 0.52 +0.3
Or see this region's nucleotide sequence